RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 LEUTXA8MZ59 168 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 OR2J2O76002 312 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 PRSS1P07477 247 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 ACAA2P42765 397 aaKnown RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CTF1Q16619 201 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CTU1Q7Z7A3 348 aaKnown RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CCDC190Q86UF4 302 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 ADAT3Q96EY9 351 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 ASIC5Q9NY37 505 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 TMED7-TICAM2A0A0A6YYA0 188 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 PDE6DO43924 150 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 NDUFB6O95139 128 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CRYABP02511 175 aaKnown RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 RIGQ13278 110 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 COL19A1Q14993 1142 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 OR5M10Q6IEU7 315 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 LILRB1Q8NHL6 650 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 RSRP1Q9BUV0 290 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM147Q9BVK8 224 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 EPHX3Q9H6B9 360 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 OR6C3Q9NZP0 311 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 TMED7Q9Y3B3 224 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CICQ96RK0 1608 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 MFNGO00587 321 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CA2P00918 260 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 DDTP30046 118 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CHST6Q9GZX3 395 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 PGA4P0DJD7 388 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 PGA5P0DJD9 388 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 UBE2V2Q15819 145 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR1L1Q8NH94 360 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 R4GMQ9 66 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 FBLL1A6NHQ2 334 aaKnown RBP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 ACOT8O14734 319 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SLC6A1P30531 599 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 IRS1P35568 1242 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 ARR3P36575 388 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 RPL27P61353 136 aaKnown RBP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 FABP5Q01469 135 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR52N4Q8NGI2 321 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR2A5Q96R48 311 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR51M1Q9H341 326 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CD3DP04234 171 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SELENBP1Q13228 472 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CLEC12BQ2HXU8 276 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 LIPIQ6XZB0 460 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 H1FXQ92522 213 aaKnown RBP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 WDFY2Q96P53 400 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 FITM1A5D6W6 292 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 GPANK1O95872 356 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 FGF2P09038 288 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CD82P27701 267 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 EMP1P54849 157 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 DLX1P56177 255 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 DEFB110Q30KQ9 67 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 LAIR1Q6GTX8 287 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR8A1Q8NGG7 326 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR1N2Q8NGR9 330 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CSF3RQ99062 836 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 AKIRIN1Q9H9L7 192 aaPredicted RBP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 MMACHCQ9Y4U1 282 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 TET1Q8NFU7 2136 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 RREB1Q92766 1687 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 PYCARD-AS1I3L0S3 204 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SEMA4FO95754 770 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 PAFAH1B2P68402 229 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SLC38A11Q08AI6 406 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CD226Q15762 336 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM81Q6P7N7 255 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM183AQ8IXX5 376 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR5C1Q8NGR4 320 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 GALMQ96C23 342 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CD207Q9UJ71 328 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 MEIKINA0A087WXM9 373 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 EFSO43281 561 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 APCSP02743 223 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 APOBEC1P41238 236 aaKnown RBP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 PPP2CBP62714 309 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CLDN10P78369 228 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 PLA1AQ53H76 456 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SCCPDHQ8NBX0 429 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR52B4Q8NGK2 314 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR5M1Q8NGP8 315 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF480Q8WV37 535 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 RNF2Q99496 336 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SH2D2AQ9NP31 389 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 P4HTMQ9NXG6 502 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SIGLEC1Q9BZZ2 1709 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 C11orf94C9JXX5 98 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 GPX2P18283 190 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CST5P28325 142 aaPredicted RBP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 LSM11P83369 360 aaKnown RBP eCLIP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 Q8IYB0 196 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR10AD1Q8NGE0 317 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR10G8Q8NGN5 311 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 MOGAT1Q96PD6 335 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 NAA60Q9H7X0 242 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SLC25A19Q9HC21 320 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 SPATA6Q9NWH7 488 aaPredicted RBP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 G3V3Y1 287 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms