RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 MED19A0JLT2 244 aaPredicted RBP12.18□□□□□ -0.46
SYNE3-201ENST00000334258 JTBO76095 146 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 WISP1O95388 367 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 MBP02144 154 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 HKR1P10072 659 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 IL12BP29460 328 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 RPS10P46783 165 aaKnown RBP12.18□□□□□ -0.46
SYNE3-201ENST00000334258 CAMLGP49069 296 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 TMEM33P57088 247 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 HGFACQ04756 655 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 FUT7Q11130 342 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 GUK1Q16774 197 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 TTLL10Q6ZVT0 673 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 TOLLIPQ9H0E2 274 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 KCNJ16Q9NPI9 418 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 EHFQ9NZC4 300 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 FBXO7Q9Y3I1 522 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 DMRT1Q9Y5R6 373 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 CRTAPO75718 401 aaPredicted RBP12.18□□□□□ -0.46
SYNE3-201ENST00000334258 OR13C7P0DN81 318 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 HLA-DOBP13765 273 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
SYNE3-201ENST00000334258 S100PBPQ96BU1 408 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 CYYR1Q96J86 154 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 RIMS4Q9H426 269 aaPredicted RBP12.18□□□□□ -0.46
SYNE3-201ENST00000334258 FAM212BQ9NTI7 297 aaPredicted RBP12.18□□□□□ -0.46
SYNE3-201ENST00000334258 TREM2Q9NZC2 230 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 SLC5A6Q9Y289 635 aa12.18□□□□□ -0.46
SYNE3-201ENST00000334258 MRPS28Q9Y2Q9 187 aaKnown RBP12.18□□□□□ -0.46
SYNE3-201ENST00000334258 YIF1AO95070 293 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 AHSA1O95433 338 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 IFNA17P01571 189 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 HCKP08631 526 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 CSNK1EP49674 416 aaKnown RBP12.17□□□□□ -0.46
SYNE3-201ENST00000334258 SULT1A1P50225 295 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 CEBPGP53567 150 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 USF2Q15853 346 aaPredicted RBP12.17□□□□□ -0.46
SYNE3-201ENST00000334258 FNDC7Q5VTL7 733 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 OR5B2Q96R09 309 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 ADAM19Q9H013 955 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 OBP2AQ9NY56 170 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 POLR1DQ9Y2S0 133 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 PUS1Q9Y606 427 aaKnown RBP eCLIP12.17□□□□□ -0.46
SYNE3-201ENST00000334258 POMT1Q9Y6A1 747 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 GPR179Q6PRD1 2367 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 A0A1W2PP11 408 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 METTL12A8MUP2 240 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 IL33O95760 270 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 CHRM2P08172 466 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 PAX6P26367 422 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 SLC6A8P48029 635 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 RNF144BQ7Z419 303 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 POC1AQ8NBT0 407 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 RNASE11Q8TAA1 199 aaKnown RBP12.17□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF519Q8TB69 540 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 SLC37A2Q8TED4 501 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 GGACTQ9BVM4 153 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 TMEM59Q9BXS4 323 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 WASF3Q9UPY6 502 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
SYNE3-201ENST00000334258 NPIPA5E9PKD4 350 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF217O75362 1048 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 ISG15P05161 165 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 S100A2P29034 98 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 DHPSP49366 369 aaPredicted RBP12.17□□□□□ -0.46
SYNE3-201ENST00000334258 RAB5CP51148 216 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 KIAA0141Q14154 515 aaPredicted RBP12.17□□□□□ -0.46
SYNE3-201ENST00000334258 C1orf140Q5VVS0 124 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 HLA-DQA1Q5Y7H0 255 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 FNDC9Q8TBE3 224 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 ARHGAP5-AS1Q96IT6 56 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 SUCNR1Q9BXA5 334 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 NPIPA1Q9UND3 350 aa12.17□□□□□ -0.46
SYNE3-201ENST00000334258 TMED7-TICAM2A0A0A6YYA0 188 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 A6NCN8 305 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 SLC2A1P11166 492 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 HIST1H1DP16402 221 aaKnown RBP12.16□□□□□ -0.46
SYNE3-201ENST00000334258 BCKDHBP21953 392 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 FPR2P25090 351 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 HOXA6P31267 233 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 FHITP49789 147 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 MAJINQ3KP22 176 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 ACTBL2Q562R1 376 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 PLAC9Q5JTB6 97 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 OR51E1Q8TCB6 317 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 MISP3Q96FF7 219 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 BMFQ96LC9 184 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 RTBDNQ9BSG5 229 aaPredicted RBP12.16□□□□□ -0.46
SYNE3-201ENST00000334258 LPAR5Q9H1C0 372 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 VSX1Q9NZR4 365 aaPredicted RBP12.16□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF878C9JN71 531 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 MT-ATP6P00846 226 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 IFNA2P01563 188 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 IFNA21P01568 189 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 PGCP20142 388 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 GNG10P50151 68 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 SNU13P55769 128 aaKnown RBP12.16□□□□□ -0.46
SYNE3-201ENST00000334258 DNM1P34Q6PK57 102 aa12.16□□□□□ -0.46
SYNE3-201ENST00000334258 OR1J1Q8NGS3 322 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms