RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 LRRC29Q8WV35 223 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 RAB40AQ8WXH6 277 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 OR5P3Q8WZ94 311 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 HIST1H2AAQ96QV6 131 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 TLNRD1Q9H1K6 362 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 MOB1AQ9H8S9 216 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 ERVK-18Q9QC07 812 aa23.04■■□□□ 1.28
ATPAF1-201ENST00000329231 IGHV2-70DA0A0C4DH43 119 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 ZNF816-ZNF321PA0A0X1KG74 233 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 TMEM210A6NLX4 147 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 LOC110117498-PIK3R3F6TDL0 507 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 FSHBP01225 129 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 OR2T7P0C7T2 308 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 ATP6V1E1P36543 226 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 CSNK2BP67870 215 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 PAX2Q02962 417 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 PAX8Q06710 450 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 MFGE8Q08431 387 aaPredicted RBP23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 ARMCX4Q5H9R4 360 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 WDR82Q6UXN9 313 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 SEMA6DQ8NFY4 1073 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 OR2T27Q8NH04 317 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 OR51E1Q8TCB6 317 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 GPR84Q9NQS5 396 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 GTF2A1LQ9UNN4 478 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 R4GMQ9 66 aa23.03■■□□□ 1.28
ATPAF1-201ENST00000329231 ERICH4A6NGS2 130 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 IGLV3-1P01715 115 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 CFHR2P36980 270 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 RIPPLY1Q0D2K3 151 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 TEX36Q5VZQ5 186 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 ZNF841Q6ZN19 808 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 KRT74Q7RTS7 529 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 THAP5Q7Z6K1 395 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 RNF170Q96K19 258 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 FAM71F1Q96KD3 344 aaPredicted RBP23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 C19orf24Q9BVV8 132 aa23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 MRM2Q9UI43 246 aaKnown RBP23.02■■□□□ 1.28
ATPAF1-201ENST00000329231 DNHD1Q96M86 4753 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 CDIPTO14735 213 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 TNFRSF13BO14836 293 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 MAGEB4O15481 346 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 ADAM20O43506 726 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 SRSF10O75494 262 aaKnown RBP23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 MTRF1O75570 445 aaKnown RBP23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 KRT8P05787 483 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 EGR1P18146 543 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 MICBQ29980 383 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 BCL2L15Q5TBC7 163 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 ZBTB37Q5TC79 503 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 KCTD8Q6ZWB6 473 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 USP43Q70EL4 1123 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 FAM90A1Q86YD7 464 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 PPP1R14AQ96A00 147 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 TBX5Q99593 518 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 GMPPBQ9Y5P6 360 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 SNX5Q9Y5X3 404 aa23.01■■□□□ 1.27
ATPAF1-201ENST00000329231 KIR2DS1A0A191URI9 304 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 A0A1W2PQL4 384 aaPredicted RBP23■■□□□ 1.27
ATPAF1-201ENST00000329231 GYPAP02724 150 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 TTRP02766 147 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 MUC1P15941 1255 aaPredicted RBP23■■□□□ 1.27
ATPAF1-201ENST00000329231 FPR2P25090 351 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 FAM76BQ5HYJ3 339 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 ELMOD2Q8IZ81 293 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 BPIFB2Q8N4F0 458 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 YIPF7Q8N8F6 280 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 OR10H4Q8NGA5 316 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 HPSE2Q8WWQ2 592 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 UBE2FQ969M7 185 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 DACT3Q96B18 629 aaPredicted RBP23■■□□□ 1.27
ATPAF1-201ENST00000329231 RDH12Q96NR8 316 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 TECTBQ96PL2 329 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 NUDT16L1Q9BRJ7 211 aaKnown RBP23■■□□□ 1.27
ATPAF1-201ENST00000329231 SUCNR1Q9BXA5 334 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 CTSZQ9UBR2 303 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 OR52A1Q9UKL2 312 aa23■■□□□ 1.27
ATPAF1-201ENST00000329231 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23■■□□□ 1.27
ATPAF1-201ENST00000329231 DHRS3O75911 302 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 APOL3O95236 402 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 PPIAL4GP0DN37 164 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 SNRPGP62308 76 aaKnown RBP22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 SLC25A30Q5SVS4 291 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 CD276Q5ZPR3 534 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 PLEKHG7Q6ZR37 379 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 SSX6Q7RTT6 188 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 OR10Z1Q8NGY1 313 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 C8orf4Q9NR00 106 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 SMPD3Q9NY59 655 aaPredicted RBP22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 ENPP5Q9UJA9 477 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 NUP50Q9UKX7 468 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 PIGLQ9Y2B2 252 aa22.99■■□□□ 1.27
ATPAF1-201ENST00000329231 DOCK11Q5JSL3 2073 aa22.98■■□□□ 1.27
ATPAF1-201ENST00000329231 IGHV3OR15-7A0A075B7D8 119 aa22.98■■□□□ 1.27
ATPAF1-201ENST00000329231 VENTXO95231 258 aa22.98■■□□□ 1.27
ATPAF1-201ENST00000329231 CEACAM21Q3KPI0 293 aa22.98■■□□□ 1.27
ATPAF1-201ENST00000329231 MEDAGQ5VYS4 303 aa22.98■■□□□ 1.27
ATPAF1-201ENST00000329231 SCCPDHQ8NBX0 429 aa22.98■■□□□ 1.27
ATPAF1-201ENST00000329231 RPL3LQ92901 407 aaKnown RBP22.98■■□□□ 1.27
ATPAF1-201ENST00000329231 JMJD8Q96S16 334 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms