RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ADAMTS18Q8TE60 1221 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 ZMYND19Q96E35 227 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 LMLNQ96KR4 655 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 SGCZQ96LD1 299 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 CNTD2Q9H8S5 307 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 ZMAT3Q9HA38 289 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 GPR35Q9HC97 309 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 SIGLEC7Q9Y286 467 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 VCANP13611 3396 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 SPTBN5Q9NRC6 3674 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 REV3LO60673 3130 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 KLF8O95600 359 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-201ENST00000328923 OR3A2P47893 321 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 FAM3AP98173 230 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 OCIAD2Q56VL3 154 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 GRINAQ7Z429 371 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF679Q8IYX0 411 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 TVP23CQ96ET8 276 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 C20orf144Q9BQM9 153 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 ABHD14AQ9BUJ0 271 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 TBL1XR1Q9BZK7 514 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 WWTR1Q9GZV5 400 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 SIDT1Q9NXL6 827 aaKnown RBP10.53□□□□□ -0.72
SHMT2-201ENST00000328923 CDV3Q9UKY7 258 aaKnown RBP10.53□□□□□ -0.72
SHMT2-201ENST00000328923 SLC7A7Q9UM01 511 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 NUMA1Q14980 2115 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 A0A0A6YYD5 115 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 RIIAD1A6NNX1 92 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 FPR2P25090 351 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 CCKARP32238 428 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 NANOS3P60323 173 aaKnown RBP10.53□□□□□ -0.72
SHMT2-201ENST00000328923 ADAM8P78325 824 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 CCL20P78556 96 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 KREMEN2Q8NCW0 462 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 OR51L1Q8NGJ5 315 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 BADQ92934 168 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 OR7D2Q96RA2 312 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 SLC25A13Q9UJS0 675 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 CLEC4EQ9ULY5 219 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF281Q9Y2X9 895 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 PAM16Q9Y3D7 125 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 INSL6Q9Y581 213 aa10.53□□□□□ -0.72
SHMT2-201ENST00000328923 TRAV8-7A0A075B6U6 113 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 BNIP3LO60238 219 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 TRAPPC6AO75865 159 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 TNFSF13O75888 250 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 JTBO76095 146 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 TOMM40O96008 361 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 PBX2P40425 430 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 SCAND1P57086 179 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 PSG6Q00889 435 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 DUSP8Q13202 625 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF627Q7L945 461 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 C17orf78Q8N4C9 275 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 OR5AK2Q8NH90 309 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 RPS4Y2Q8TD47 263 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 OR10C1Q96KK4 312 aa10.52□□□□□ -0.72
SHMT2-201ENST00000328923 CIB3Q96Q77 187 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-201ENST00000328923 CXXC1Q9P0U4 656 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-201ENST00000328923 RCL1Q9Y2P8 373 aaKnown RBP10.52□□□□□ -0.72
SHMT2-201ENST00000328923 MDC1Q14676 2089 aaKnown RBP10.52□□□□□ -0.73
SHMT2-201ENST00000328923 PPP5D1E7EU14 171 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 SRPX2O60687 465 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-201ENST00000328923 KAT7O95251 611 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 ERGP11308 486 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 RIPPLY3P57055 190 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 NHLH1Q02575 133 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 SSBP1Q04837 148 aaKnown RBP10.52□□□□□ -0.73
SHMT2-201ENST00000328923 SPEM2Q0P670 501 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 FOXF1Q12946 379 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 GPR18Q14330 331 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 WDR73Q6P4I2 378 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 NRSN1Q8IZ57 195 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 CYB561D1Q8N8Q1 229 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 ABHD3Q8WU67 409 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM106AQ96A25 262 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 PCGF1Q9BSM1 259 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 SLC46A2Q9BY10 475 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 TM7SF3Q9NS93 570 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 CLEC5AQ9NY25 188 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF581Q9P0T4 197 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 KLK13Q9UKR3 277 aa10.52□□□□□ -0.73
SHMT2-201ENST00000328923 A0A1W2PR48 441 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 HIDE1A8MVS5 230 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 CCL16O15467 120 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 FBXO45P0C2W1 286 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 OR2T7P0C7T2 308 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 CD33P20138 364 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 FCGR2CP31995 323 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 CCR2P41597 374 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 PDLIM4P50479 330 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 PRKAG1P54619 331 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM33P57088 247 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 GNB2P62879 340 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 GGTLC2Q14390 218 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 FBLN7Q53RD9 439 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 FAM78AQ5JUQ0 283 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 METRNLQ641Q3 311 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 THSD4Q6ZMP0 1018 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 OR5D18Q8NGL1 313 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms