RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 FAM222BQ8WU58 562 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 PIGCQ92535 297 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 FOXRED1Q96CU9 486 aaPredicted RBP8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 KCTD12Q96CX2 325 aaKnown RBP8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 METTL17Q9H7H0 456 aaPredicted RBP8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 ABCB9Q9NP78 766 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 CA10Q9NS85 328 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 FZR1Q9UM11 496 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 RNF115Q9Y4L5 304 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 MPC1Q9Y5U8 109 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 ATP23Q9Y6H3 246 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 IGLV3-9A0A075B6K5 115 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 MAGEB3O15480 346 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 TIMM8AO60220 97 aaPredicted RBP8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 HCKP08631 526 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 OCMP0CE72 109 aaPredicted RBP8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 LOXP28300 417 aaPredicted RBP8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 FABP6P51161 128 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 KLF3P57682 345 aaPredicted RBP8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 DYNC1I2Q13409 638 aaKnown RBP8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 ALKBH6Q3KRA9 238 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 MOB3CQ70IA8 216 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 SSC4DQ8WTU2 575 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 DAPK2Q9UIK4 370 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 CMAHPQ9Y471 501 aa8.77□□□□□ -1.01
VIPAS39-201ENST00000327028 SLC17A2O00624 439 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 CLPXO76031 633 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 IGHV3-13P01766 116 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 SLC2A2P11168 524 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 PLA2G2AP14555 144 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 THBS2P35442 1172 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 SRSF1Q07955 248 aaKnown RBP eCLIP8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 C1orf100Q5SVJ3 147 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 IDNKQ5T6J7 187 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 HES5Q5TA89 166 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 VHLLQ6RSH7 139 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 JAGN1Q8N5M9 183 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 ACBD4Q8NC06 268 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 OR8G5Q8NG78 346 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 NPRL2Q8WTW4 380 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 ACOT12Q8WYK0 555 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 MRPL24Q96A35 216 aaKnown RBP8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 UQCC2Q9BRT2 126 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 TMEM204Q9BSN7 226 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 MMP27Q9H306 513 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 PPP1R3EQ9H7J1 279 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 SMURF1Q9HCE7 757 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 CGGBP1Q9UFW8 167 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 POU2F3Q9UKI9 436 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 SLC7A11Q9UPY5 501 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 FUT6P51993 359 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 RAB11BQ15907 218 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 FAM166AQ6J272 317 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 LHFPL2Q6ZUX7 228 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 OR6M1Q8NGM8 313 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 HPSE2Q8WWQ2 592 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 CPNE2Q96FN4 548 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 SORCS2Q96PQ0 1159 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 SLC22A4Q9H015 551 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 PLGRKTQ9HBL7 147 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 STEAP1Q9UHE8 339 aa8.76□□□□□ -1.01
VIPAS39-201ENST00000327028 ADGRG4Q8IZF6 3080 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 A0A1B0GWJ7 208 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 CA6P23280 308 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 ZNF93P35789 620 aaPredicted RBP8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 SELENOVP59797 346 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 CEACAM21Q3KPI0 293 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 LRP11Q86VZ4 500 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 TRMT10AQ8TBZ6 339 aaKnown RBP8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 OR5P3Q8WZ94 311 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 ITPKCQ96DU7 683 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 PIK3IP1Q96FE7 263 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 BORCS8Q96FH0 119 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 HS3ST6Q96QI5 342 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 HIST1H2AAQ96QV6 131 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 ADAT1Q9BUB4 502 aaKnown RBP8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 MRI1Q9BV20 369 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 MRPL37Q9BZE1 423 aaKnown RBP8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 C6orf62Q9GZU0 229 aaPredicted RBP8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 ABRACLQ9P1F3 81 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 NOP16Q9Y3C1 178 aaKnown RBP8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 PQLC2LA1A4F0 135 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 CLEC18AA5D8T8 446 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 HTR2CP28335 458 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 RIN1Q13671 783 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 KISS1Q15726 138 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 MZT2AQ6P582 158 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 CRIP3Q6Q6R5 217 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 CLEC18BQ6UXF7 455 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 CLEC18CQ8NCF0 446 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 OR5A2Q8NGI9 324 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 SPACA5Q96QH8 159 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 SYT3Q9BQG1 590 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 FGF23Q9GZV9 251 aaPredicted RBP8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 TMEM100Q9NV29 134 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 MYEF2Q9P2K5 600 aaKnown RBP8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 DUSP13Q9UII6 198 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 LRRK2Q5S007 2527 aa8.75□□□□□ -1.01
VIPAS39-201ENST00000327028 FAM230AA0A1W2PPH8 454 aa8.74□□□□□ -1.01
VIPAS39-201ENST00000327028 OR5B21A6NL26 309 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms