RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 ANOS1P23352 680 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 CHRNB4P30926 498 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 HTR2BP41595 481 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 MTNR1BP49286 362 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 DDI2Q5TDH0 399 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF584Q8IVC4 421 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 OR2AE1Q8NHA4 323 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 TMEM68Q96MH6 324 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 DERL3Q96Q80 235 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 TCF7L1Q9HCS4 588 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 COMMD3Q9UBI1 195 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 BOLA1Q9Y3E2 137 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 DIDO1Q9BTC0 2240 aaKnown RBP8.7□□□□□ -1.02
HMGB3-201ENST00000325307 A6NIN4 97 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ISG15P05161 165 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 CBR1P16152 277 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 FAM131AQ6UXB0 335 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 NRARPQ7Z6K4 114 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 OR4M2Q8NGB6 313 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 POM121L2Q96KW2 1035 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 SEC22CQ9BRL7 303 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 SLITRK2Q9H156 845 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 OBP2BQ9NPH6 170 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ELOVL5Q9NYP7 299 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 TRBV5-5A0A0J9YX44 114 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 A0A1B0GUH1 482 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 GLAP06280 429 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 UCHL1P09936 223 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF16P17020 682 aaPredicted RBP8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF20P17024 532 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 TIMM23BQ5SRD1 257 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 CNIH2Q6PI25 160 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 PRSS45Q7RTY3 260 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 CA5BP1Q8WTZ4 195 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 THRSPQ92748 146 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 CCDC120Q96HB5 630 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 DIRAS2Q96HU8 199 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 CKLFQ9UBR5 152 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ERRFI1Q9UJM3 462 aaPredicted RBP8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF14P17017 642 aaPredicted RBP8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ATF4P18848 351 aaPredicted RBP8.69□□□□□ -1.02
HMGB3-201ENST00000325307 HLA-DMAP28067 261 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ERP29P30040 261 aaKnown RBP8.69□□□□□ -1.02
HMGB3-201ENST00000325307 TALDO1P37837 337 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF83P51522 516 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 PRSS12P56730 875 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 PPA1Q15181 289 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 SLC25A35Q3KQZ1 300 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 DOK3Q7L591 496 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 MYPOPQ86VE0 399 aaPredicted RBP8.69□□□□□ -1.02
HMGB3-201ENST00000325307 OR8H2Q8N162 312 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 OR1J2Q8NGS2 313 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ASB5Q8WWX0 329 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 ZC3HAV1LQ96H79 300 aaKnown RBP8.69□□□□□ -1.02
HMGB3-201ENST00000325307 REEP6Q96HR9 211 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 BBC3Q96PG8 261 aaPredicted RBP8.69□□□□□ -1.02
HMGB3-201ENST00000325307 SOX7Q9BT81 388 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 BCL2L14Q9BZR8 327 aa8.69□□□□□ -1.02
HMGB3-201ENST00000325307 LMX1BO60663 402 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 PPP3R1P63098 170 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 PAQR4Q8N4S7 273 aaPredicted RBP8.68□□□□□ -1.02
HMGB3-201ENST00000325307 PHYHIPQ92561 330 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 AP3S1Q92572 193 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 APOBEC3DQ96AK3 386 aaPredicted RBP8.68□□□□□ -1.02
HMGB3-201ENST00000325307 FGGYQ96C11 551 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 SLC25A15Q9Y619 301 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 A0A0U1RQV5 110 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 FABP12A6NFH5 140 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 M0R1B8 84 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 PIN1P1O15428 100 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 PLA2G10O15496 165 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 HLA-DQB1P01920 261 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 ELK1P19419 428 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 SRMP19623 302 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 EVX1P49640 407 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 ADORA2A-AS1P86434 159 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 MALLQ13021 153 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 TAB1Q15750 504 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 KRTAP27-1Q3LI81 207 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 TOR2AQ5JU69 321 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 GLYATL3Q5SZD4 288 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 UNQ9370/PRO34162Q6UXP9 181 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 GFI1Q99684 422 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 A0A1B0GTI1 187 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 MEIOCA2RUB1 952 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
HMGB3-201ENST00000325307 APOA1P02647 267 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 RAF1P04049 648 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 MAS1P04201 325 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 FAM157BP0CG42 384 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 ASCL1P50553 236 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 LAMTOR1Q6IAA8 161 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 BOD1Q96IK1 185 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 C1QTNF5Q9BXJ0 243 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 JKAMPQ9P055 326 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 PRR14LQ5THK1 2151 aa8.68□□□□□ -1.02
HMGB3-201ENST00000325307 A0A0B4J293 547 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 NKX2-6A6NCS4 301 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 NGFP01138 241 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms