RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 NDUFB6O95139 128 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 PLA1AQ53H76 456 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 TMEM88Q6PEY1 159 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 ORAI1Q96D31 301 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 TRAPPC1Q9Y5R8 145 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 SMAD4Q13485 552 aaKnown RBP18.9■□□□□ 0.62
RNF40-201ENST00000324685 CTF1Q16619 201 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 SLC2A8Q9NY64 477 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 SLC16A12Q6ZSM3 486 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 LRFN3Q9BTN0 628 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 ZNF391Q9UJN7 358 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 LSM2Q9Y333 95 aaKnown RBP18.9■□□□□ 0.62
RNF40-201ENST00000324685 SH2D7A6NKC9 451 aaPredicted RBP18.9■□□□□ 0.62
RNF40-201ENST00000324685 SRFP11831 508 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 BMI1P35226 326 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 IGFBP7Q16270 282 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 MOB3AQ96BX8 217 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 NOL4LQ96MY1 436 aaPredicted RBP18.9■□□□□ 0.62
RNF40-201ENST00000324685 R3HDMLQ9H3Y0 253 aa18.9■□□□□ 0.62
RNF40-201ENST00000324685 CEACAM16Q2WEN9 425 aa18.89■□□□□ 0.62
RNF40-201ENST00000324685 AKR7LQ8NHP1 331 aa18.89■□□□□ 0.62
RNF40-201ENST00000324685 TOLLIPQ9H0E2 274 aa18.89■□□□□ 0.62
RNF40-201ENST00000324685 HES4Q9HCC6 221 aa18.89■□□□□ 0.62
RNF40-201ENST00000324685 ANKRD36CQ5JPF3 1778 aa18.89■□□□□ 0.62
RNF40-201ENST00000324685 CDAP32320 146 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 GFERP55789 205 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 LRRC10Q5BKY1 277 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 OR2A2Q6IF42 318 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 TMED3Q9Y3Q3 217 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 CHD4Q14839 1912 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 HSBP1O75506 76 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 AMTP48728 403 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 TMEM240Q5SV17 173 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 ACY3Q96HD9 319 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 VAMP8Q9BV40 100 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 HNRNPA3P51991 378 aaKnown RBP18.89■□□□□ 0.61
RNF40-201ENST00000324685 GUK1Q16774 197 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 AAMDCQ9H7C9 122 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 A0A0B4J2E0 115 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 A0A1B0GX12 115 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 PGA3P0DJD8 388 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 TMPRSS11FQ6ZWK6 438 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 OR2M7Q8NG81 312 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 TMEM56Q96MV1 263 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 HES7Q9BYE0 225 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 IL20Q9NYY1 176 aa18.89■□□□□ 0.61
RNF40-201ENST00000324685 TNFSF15O95150 251 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 FGF9P31371 208 aaPredicted RBP18.88■□□□□ 0.61
RNF40-201ENST00000324685 CLEC12BQ2HXU8 276 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 PRSS36Q5K4E3 855 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 ANKRD53Q8N9V6 530 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 NDUFB3O43676 98 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 DUS4LO95620 317 aaKnown RBP18.88■□□□□ 0.61
RNF40-201ENST00000324685 TSPAN12O95859 305 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 DEFB109BQ30KR1 87 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 KTI12Q96EK9 354 aaPredicted RBP18.88■□□□□ 0.61
RNF40-201ENST00000324685 OR2J3O76001 311 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 UQCC1Q9NVA1 299 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 LOC102723971A0A1B0GUV8 181 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 TCAPO15273 167 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 SCAND1P57086 179 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 RHNO1Q9BSD3 238 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 PLSCR3Q9NRY6 295 aa18.88■□□□□ 0.61
RNF40-201ENST00000324685 RGPD1P0DJD0 1748 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 PRKNO60260 465 aaPredicted RBP18.87■□□□□ 0.61
RNF40-201ENST00000324685 EPHA2P29317 976 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 MIDNQ504T8 468 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 MFRPQ9BY79 579 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 PARD6AQ9NPB6 346 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 TNFRSF1AP19438 455 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 TRAT1Q6PIZ9 186 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 USF1P22415 310 aaPredicted RBP18.87■□□□□ 0.61
RNF40-201ENST00000324685 MDH2P40926 338 aaKnown RBP18.87■□□□□ 0.61
RNF40-201ENST00000324685 ADAT1Q9BUB4 502 aaKnown RBP18.87■□□□□ 0.61
RNF40-201ENST00000324685 ZNF785A8K8V0 405 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 SFT2D2O95562 160 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 MMP7P09237 267 aaPredicted RBP18.87■□□□□ 0.61
RNF40-201ENST00000324685 PRDX4Q13162 271 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 OTPQ5XKR4 325 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 ANGPTL6Q8NI99 470 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 BCL2L2Q92843 193 aaPredicted RBP18.87■□□□□ 0.61
RNF40-201ENST00000324685 TMEM272A0A1B0GTI8 110 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 TBX19O60806 448 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 CST7O76096 145 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 GNG3P63215 75 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 GSG1Q2KHT4 349 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 FAM27D1Q5T7N8 215 aa18.87■□□□□ 0.61
RNF40-201ENST00000324685 PRR35P0CG20 571 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 AVPR2P30518 371 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 FAM3AP98173 230 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 ETFRF1Q6IPR1 90 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 RAB40CQ96S21 281 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 SCO1O75880 301 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 WDFY2Q96P53 400 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 EXOGQ9Y2C4 368 aaKnown RBP18.86■□□□□ 0.61
RNF40-201ENST00000324685 TOX3O15405 576 aaPredicted RBP18.86■□□□□ 0.61
RNF40-201ENST00000324685 NQO2P16083 231 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 MOB3BQ86TA1 216 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 H3BP45 60 aa18.86■□□□□ 0.61
RNF40-201ENST00000324685 SEMG1P04279 462 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms