RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CHST5Q9GZS9 411 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 POFUT1Q9H488 388 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 ELL3Q9HB65 397 aaPredicted RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 PARD6AQ9NPB6 346 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 IFT46Q9NQC8 304 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 ZNF224Q9NZL3 707 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 FBLN5Q9UBX5 448 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 KCNK7Q9Y2U2 307 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 NPTNQ9Y639 398 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 CNOT1A5YKK6 2376 aaKnown RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 TMEM82A0PJX8 343 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SMAD7O15105 426 aaKnown RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 CD74P04233 296 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 ZNF735P0CB33 412 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 PRF1P14222 555 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 ZNF708P17019 499 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SSTR2P30874 369 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 THBS4P35443 961 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 MEOX1P50221 254 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 TMEM50BP56557 158 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 GNG2P59768 71 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 C3AR1Q16581 482 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 ALKBH2Q6NS38 261 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 OR2W3Q7Z3T1 314 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SEMA6DQ8NFY4 1073 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SSC4DQ8WTU2 575 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 TNFAIP8L1Q8WVP5 186 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 WDR89Q96FK6 387 aaPredicted RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 S100A13Q99584 98 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SLC25A21Q9BQT8 299 aaPredicted RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 CST11Q9H112 138 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SLC7A10Q9NS82 523 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 UPB1Q9UBR1 384 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SLC23A1Q9UHI7 598 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 DMXL1Q9Y485 3027 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 A0A096LPE4 126 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 A0A1W2PPZ6 126 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 KLRC4-KLRK1H3BQV0 150 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 FARS2O95363 451 aaKnown RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 SYNGR4O95473 234 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SIX6O95475 246 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SERPINA2P20848 420 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 HRH1P35367 487 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 GSK3AP49840 483 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 PPIAP62937 165 aaKnown RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 CRIP3Q6Q6R5 217 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 C17orf107Q6ZR85 190 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 SPICQ8N5J4 248 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 ZDHHC16Q969W1 377 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 URM1Q9BTM9 101 aaKnown RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 OR2H1Q9GZK4 316 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 WNT5BQ9H1J7 359 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 GPR173Q9NS66 373 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 FAM86C1Q9NVL1 165 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 PIPOXQ9P0Z9 390 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 PFDN2Q9UHV9 154 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 ZNF107Q9UII5 783 aaPredicted RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 MCTS1Q9ULC4 181 aaKnown RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 KLF13Q9Y2Y9 288 aaPredicted RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 ZNF407Q9C0G0 2248 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 OR6C6A6NF89 314 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 G3V3Q6 166 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 SSX5O60225 188 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 OR4E1P0C645 316 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 FTH1P19P0C7X4 201 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 HIST1H1DP16402 221 aaKnown RBP6.6□□□□□ -1.35
IFT88-201ENST00000319980 ZNF81P51508 661 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 MTCP1P56278 107 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 PCBD1P61457 104 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 ARG2P78540 354 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 C2orf68Q2NKX9 166 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 LGALSLQ3ZCW2 172 aaPredicted RBP6.6□□□□□ -1.35
IFT88-201ENST00000319980 PIP4P1Q86T03 277 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 OR51T1Q8NGJ9 327 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 OR13C8Q8NGS7 320 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 HAS2Q92819 552 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 SNAPC3Q92966 411 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 ARHGAP5-AS1Q96IT6 56 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 PTTG3PQ9NZH4 202 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 DNAJC13O75165 2243 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 PRRC2CQ9Y520 2896 aaKnown RBP6.6□□□□□ -1.35
IFT88-201ENST00000319980 IGKV3D-15A0A087WSY6 115 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 FAM230AA0A1W2PPH8 454 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 OR14I1A6ND48 311 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 DISC1C4P0D8 188 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 NME2P1O60361 137 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 PLATP00750 562 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 UBBP0CG47 229 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 LIPCP11150 499 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 MGMTP16455 207 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 NME2P22392 152 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 CCNOP22674 350 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 H2BFSP57053 126 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 TSPAN5P62079 268 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 RIPPLY1Q0D2K3 151 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 MEF2DQ14814 521 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 SLC10A1Q14973 349 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 PABPC1L2AQ5JQF8 200 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 ATPAF1Q5TC12 328 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms