RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TMEM38BQ9NVV0 291 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 KLHDC2Q9Y2U9 406 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 SPINT2O43291 252 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 CD59P13987 128 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 MPGP29372 298 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 SHISA5Q8N114 240 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 ZNF610Q8N9Z0 462 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 LRRC20Q8TCA0 184 aa12.09□□□□□ -0.47
DDX54-202ENST00000314045 IGF2P01344 180 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 GLI4P10075 376 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 H1FXQ92522 213 aaKnown RBP12.08□□□□□ -0.48
DDX54-202ENST00000314045 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 MESP1Q9BRJ9 268 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 RNF32Q9H0A6 362 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 SPDEFO95238 335 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 UMODP07911 640 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 CEACAM1P13688 526 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 TGM1P22735 817 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 GGTLC2Q14390 218 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 CATSPERDQ86XM0 798 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 TMEM185AQ8NFB2 350 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 FLVCR1Q9Y5Y0 555 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 LRP3O75074 770 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 NDUFB7P17568 137 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 SLC7A5P1Q8MH63 180 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 RFLNBQ8N5W9 214 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 ADPRHL1Q8NDY3 354 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 C1orf123Q9NWV4 160 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 PCNX2A6NKB5 2137 aa12.08□□□□□ -0.48
DDX54-202ENST00000314045 CUL9Q8IWT3 2517 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 MEIKINA0A087WXM9 373 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 CA6P23280 308 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 SSTR2P30874 369 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 NANOS3P60323 173 aaKnown RBP12.07□□□□□ -0.48
DDX54-202ENST00000314045 COL19A1Q14993 1142 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 PLK3Q9H4B4 646 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 TAS2R3Q9NYW6 316 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 CHCHD2Q9Y6H1 151 aaPredicted RBP12.07□□□□□ -0.48
DDX54-202ENST00000314045 NKX6-3A6NJ46 265 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 SIX6O95475 246 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 RFX2P48378 723 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 DEFA5Q01523 94 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 FAM76BQ5HYJ3 339 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 FBXW9Q5XUX1 488 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 WDSUB1Q8N9V3 476 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 KCNK17Q96T54 332 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 POLEQ07864 2286 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 PRR33A8MZF0 331 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 C9orf172C9J069 976 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 PHF1O43189 567 aaPredicted RBP12.07□□□□□ -0.48
DDX54-202ENST00000314045 KLF4O43474 513 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 ADAM11O75078 769 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 HRH1P35367 487 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 EIF2S3LQ2VIR3 472 aaKnown RBP12.07□□□□□ -0.48
DDX54-202ENST00000314045 ASB5Q8WWX0 329 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 ZNF2Q9BSG1 426 aaPredicted RBP12.07□□□□□ -0.48
DDX54-202ENST00000314045 CNTD2Q9H8S5 307 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 SLC17A5Q9NRA2 495 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 QPCTLQ9NXS2 382 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 NPAP1Q9NZP6 1156 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 FLVCR2Q9UPI3 526 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 LSM2Q9Y333 95 aaKnown RBP12.07□□□□□ -0.48
DDX54-202ENST00000314045 RNF212BA8MTL3 300 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 OR5H8P0DN80 308 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 PRDX4Q13162 271 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 SFRP5Q5T4F7 317 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 ZNF767PQ75MW2 155 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 OR4C16Q8NGL9 310 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 OR10J5Q8NHC4 309 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 GLYATL2Q8WU03 294 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 BOD1Q96IK1 185 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 OR2H1Q9GZK4 316 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 ST6GALNAC2Q9UJ37 374 aa12.07□□□□□ -0.48
DDX54-202ENST00000314045 SPTBN1Q01082 2364 aaKnown RBP12.06□□□□□ -0.48
DDX54-202ENST00000314045 TRAV8-7A0A075B6U6 113 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 SERPINE3A8MV23 424 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 FUT3P21217 361 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 ECI1P42126 302 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 PDCD1Q15116 288 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 BEX5Q5H9J7 111 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 FAM27BQ5VT28 67 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 CD276Q5ZPR3 534 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 RHOUQ7L0Q8 258 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 CMBLQ96DG6 245 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 ABHD1Q96SE0 405 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 POFUT1Q9H488 388 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 NUP50Q9UKX7 468 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 IGLV1-36A0A0B4J1U3 117 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 TMEM272A0A1B0GTI8 110 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 GLAP06280 429 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 PI3P19957 117 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 NFYBP25208 207 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 UCNP55089 124 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 MSMO1Q15800 293 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 LILRB2Q8N423 598 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 AMELYQ99218 206 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms