RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 DANCRP0C864 163 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 RAC2P15153 192 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 SELEP16581 610 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 GALP22466 123 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 CCR9P51686 369 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 TMEM91Q6ZNR0 172 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 Q6ZR03 302 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 OR13C3Q8NGS6 347 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 TSEN15Q8WW01 171 aaKnown RBP15.51■□□□□ 0.07
HMGA1-201ENST00000311487 C14orf79Q96F83 325 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 DAPK2Q9UIK4 370 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 ACOD1A6NK06 481 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 TMEM212A6NML5 194 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 SPRY3O43610 288 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 TNFSF8P32971 234 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 OXA1LQ15070 435 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 SPRNQ5BIV9 151 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 CEP78Q5JTW2 689 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 PIGCQ92535 297 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 FGGYQ96C11 551 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 VRK1Q99986 396 aaPredicted RBP15.51■□□□□ 0.07
HMGA1-201ENST00000311487 GPR160Q9UJ42 338 aa15.51■□□□□ 0.07
HMGA1-201ENST00000311487 ASH1LQ9NR48 2969 aaKnown RBP15.5■□□□□ 0.07
HMGA1-201ENST00000311487 PLPP2O43688 288 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 RGS9O75916 674 aaPredicted RBP15.5■□□□□ 0.07
HMGA1-201ENST00000311487 IGLV3-1P01715 115 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 IGHV3-13P01766 116 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 OCM2P0CE71 109 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 OCMP0CE72 109 aaPredicted RBP15.5■□□□□ 0.07
HMGA1-201ENST00000311487 UBCP0CG48 685 aaKnown RBP15.5■□□□□ 0.07
HMGA1-201ENST00000311487 TAS2R43P59537 309 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 SELENOVP59797 346 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 RPS11P62280 158 aaKnown RBP eCLIP15.5■□□□□ 0.07
HMGA1-201ENST00000311487 ZNF544Q6NX49 715 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 SEMA6DQ8NFY4 1073 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 OR14K1Q8NGZ2 314 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 ADAT3Q96EY9 351 aaPredicted RBP15.5■□□□□ 0.07
HMGA1-201ENST00000311487 CEP19Q96LK0 163 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 OR14A2Q96R54 314 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 PAPOLGQ9BWT3 736 aaKnown RBP15.5■□□□□ 0.07
HMGA1-201ENST00000311487 PLEKHA6Q9Y2H5 1048 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 ZNF281Q9Y2X9 895 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 ARFGEF3Q5TH69 2177 aa15.5■□□□□ 0.07
HMGA1-201ENST00000311487 IGLV3-9A0A075B6K5 115 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 SHISA3A0PJX4 238 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 SMIM30A4D0T7 59 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 ZSCAN5BA6NJL1 495 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 ZNF850A8MQ14 1090 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 VSTM5A8MXK1 200 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 J3QW42 95 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 DHRS3O75911 302 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 LY6HO94772 140 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 CD53P19397 219 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 SSTR2P30874 369 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 MMP15P51511 669 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 SWI5Q1ZZU3 235 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 SPANXN2Q5MJ10 180 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 FAM27D1Q5T7N8 215 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 ZNF611Q8N823 705 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 OR2Z1Q8NG97 314 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 NPRL2Q8WTW4 380 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 WDFY2Q96P53 400 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 NKX3-1Q99801 234 aaPredicted RBP15.49■□□□□ 0.07
HMGA1-201ENST00000311487 RGCCQ9H4X1 137 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 PLEKHA1Q9HB21 404 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 DYNLRB1Q9NP97 96 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 ABCB10Q9NRK6 738 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 TREM2Q9NZC2 230 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 HHLA2Q9UM44 414 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 PLSCR5A0PG75 271 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 RGS5O15539 181 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 NDUFS7O75251 213 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 PSMD7P51665 324 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 MRPL28Q13084 256 aaKnown RBP15.49■□□□□ 0.07
HMGA1-201ENST00000311487 OR8B8Q15620 311 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 ZNF181Q2M3W8 571 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 TRIM16LQ309B1 348 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 TMEM244Q5VVB8 128 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 DOK3Q7L591 496 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 LYSMD2Q8IV50 215 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 LAX1Q8IWV1 398 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 RPS4Y2Q8TD47 263 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 SLC30A2Q9BRI3 323 aa15.49■□□□□ 0.07
HMGA1-201ENST00000311487 B9A039 149 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 ISG15P05161 165 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 KITLGP21583 273 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 GNALP38405 381 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 CAV3P56539 151 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 AGAP6Q5VW22 663 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 OR8G5Q8NG78 346 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 CCL19Q99731 98 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 CACNG6Q9BXT2 260 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 GPR173Q9NS66 373 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 CBLN4Q9NTU7 201 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 DHDHQ9UQ10 334 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 V9GYS6 101 aa15.48■□□□□ 0.07
HMGA1-201ENST00000311487 RAI1Q7Z5J4 1906 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-201ENST00000311487 IQCF6A8MYZ5 107 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 F5H5P2 479 aa15.47■□□□□ 0.07
HMGA1-201ENST00000311487 M0R233 179 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms