RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ZNF775Q96BV0 537 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 OR8B4Q96RC9 309 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM231Q9H6L2 316 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 BMPR1BO00238 502 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 PLPP1O14494 284 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 CRYABP02511 175 aaKnown RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 COL9A3Q14050 684 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 MLF2Q15773 248 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 FAM74A3Q4VXF1 159 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF384Q8TF68 577 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 DUS3LQ96G46 650 aaKnown RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 CHST2Q9Y4C5 530 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 GP1BAP07359 652 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 PTGER1P34995 402 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 EXOSC2Q13868 293 aaKnown RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM52BQ4KMG9 183 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 STUMQ69YW2 141 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 ACER3Q9NUN7 267 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 TAAR3PQ9P1P4 343 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 GDF2Q9UK05 429 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 B4DEV8 164 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 PMCHP20382 165 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 FPR2P25090 351 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 RAG2P55895 527 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 MIDNQ504T8 468 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF766Q5HY98 468 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 OR2W3Q7Z3T1 314 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 PELI3Q8N2H9 469 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 SLC16A11Q8NCK7 471 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 OR52L2PQ8NGH6 319 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 NUMBLQ9Y6R0 609 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM238LA0A1B0GVL6 79 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 A6NJY4 79 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 ATP6V1FQ16864 119 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 PDXPQ96GD0 296 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 RPA2P15927 270 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 HIST1H1BP16401 226 aaKnown RBP14□□□□□ -0.17
HCFC1-201ENST00000310441 PPOXP50336 477 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 LPAL2Q16609 132 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 C11orf87Q6NUJ2 197 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 UQCC1Q9NVA1 299 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 CCSO14618 274 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 THBS4P35443 961 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 HOXA4Q00056 320 aaPredicted RBP14□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM241Q24JQ0 296 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 GGNBP1Q5YKI7 109 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 STAC2Q6ZMT1 411 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 Q6ZPB1 254 aaPredicted RBP14□□□□□ -0.17
HCFC1-201ENST00000310441 STRCQ7RTU9 1775 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 A0A1B0GTQ1 180 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 PMS2P11Q13670 270 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 NKAIN2Q5VXU1 208 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 GPR137Q96N19 417 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 SDF2Q99470 211 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 DUXBA0A1W2PPF3 345 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 FITM1A5D6W6 292 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 GUSBP08236 651 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 OPRK1P41145 380 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 FAM3AP98173 230 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 DGAT2L7PQ6IED9 249 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 RGS7BPQ6MZT1 257 aaPredicted RBP14□□□□□ -0.17
HCFC1-201ENST00000310441 PERPQ96FX8 193 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 FCN1O00602 326 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 XKR7Q5GH72 579 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 PRSS45Q7RTY3 260 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 LILRB1Q8NHL6 650 aaPredicted RBP14□□□□□ -0.17
HCFC1-201ENST00000310441 KISS1RQ969F8 398 aaPredicted RBP14□□□□□ -0.17
HCFC1-201ENST00000310441 HAPLN2Q9GZV7 340 aa14□□□□□ -0.17
HCFC1-201ENST00000310441 IAPPP10997 89 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 PRRX1P54821 245 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 FAM53BQ14153 422 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 ACKR1Q16570 336 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 DUSP5Q16690 384 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM88Q6PEY1 159 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 SLC16A12Q6ZSM3 486 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 MS4A10Q96PG2 267 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 SH2D2AQ9NP31 389 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 C5orf52A6NGY3 159 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 M0R1B8 84 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 NPPBP16860 134 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 ISL1P61371 349 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 PPIAP62937 165 aaKnown RBP13.99□□□□□ -0.17
HCFC1-201ENST00000310441 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
HCFC1-201ENST00000310441 HELTA6NFD8 242 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF343Q6P1L6 599 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 OR2J2O76002 312 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 FABP4P15090 132 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 PPICP45877 212 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 DGCR2P98153 550 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 NHLRC1Q6VVB1 395 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 LRP11Q86VZ4 500 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 GAL3ST2Q9H3Q3 398 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 DAPP1Q9UN19 280 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 FRG2CA6NGY1 282 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 OR52N5Q8NH56 324 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 PCDHGA9Q9Y5G4 932 aaKnown RBP13.99□□□□□ -0.17
HCFC1-201ENST00000310441 GATCO43716 136 aaKnown RBP13.99□□□□□ -0.17
HCFC1-201ENST00000310441 ACP1P24666 158 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 MYOZ1Q9NP98 299 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms