RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 MRGPRDQ8TDS7 321 aa7.17□□□□□ -1.26
CHD6-201ENST00000309279 SLC25A44Q96H78 314 aaPredicted RBP7.17□□□□□ -1.26
CHD6-201ENST00000309279 NIPSNAP1Q9BPW8 284 aa7.17□□□□□ -1.26
CHD6-201ENST00000309279 EMC6Q9BV81 110 aa7.17□□□□□ -1.26
CHD6-201ENST00000309279 JAM3Q9BX67 310 aa7.17□□□□□ -1.26
CHD6-201ENST00000309279 SLC7A10Q9NS82 523 aa7.17□□□□□ -1.26
CHD6-201ENST00000309279 SLC2A8Q9NY64 477 aa7.17□□□□□ -1.26
CHD6-201ENST00000309279 CRIM1Q9NZV1 1036 aa7.17□□□□□ -1.26
CHD6-201ENST00000309279 PRR14LQ5THK1 2151 aa7.17□□□□□ -1.26
CHD6-201ENST00000309279 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 ZNF726A6NNF4 738 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 G3V2T6 193 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 C19orf84I3L1E1 186 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 SSX4O60224 188 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TXNDC12O95881 172 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 IGHV3-9P01782 118 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 PGA4P0DJD7 388 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 PGA3P0DJD8 388 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 PSMB1P20618 241 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 COX5AP20674 150 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 PRKACGP22612 351 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 UGT2B10P36537 528 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TALDO1P37837 337 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 DAP3P51398 398 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 BIDP55957 195 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TMEM33P57088 247 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 CTXN1P60606 82 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 RPL27P61353 136 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 ADARB1P78563 741 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 FGL1Q08830 312 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 FAHD1Q6P587 224 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 RNASEKQ6P5S7 137 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 DPY19L2P2Q6ZN68 376 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 HDDC2Q7Z4H3 204 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ZNF546Q86UE3 836 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ZDHHC13Q8IUH4 622 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 C20orf196Q8IYI0 205 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ZFP82Q8N141 532 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 SVOPLQ8N434 492 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ZNF519Q8TB69 540 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 FBLIM1Q8WUP2 373 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ASB10Q8WXI3 467 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 NSMAFQ92636 917 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 HDHD5Q9BXW7 423 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 GABARAPL1Q9H0R8 117 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 OR52D1Q9H346 318 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 MOV10Q9HCE1 1003 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 ASB6Q9NWX5 421 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 FBXL3Q9UKT7 428 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ZNF346Q9UL40 294 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 SLC22A13Q9Y226 551 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 FOXA2Q9Y261 457 aaPredicted RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 RNASEK-C17orf49H0YIS7 233 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 C16orf97H3BN30 126 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 P2RY10O00398 339 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 IMPA2O14732 288 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 CST4P01036 141 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 IGHG1P01857 330 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ACADSP16219 412 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 IGHV1-2P23083 117 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 MPGP29372 298 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 RPL4P36578 427 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 PPT1P50897 306 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ZNF133P52736 654 aaPredicted RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 HERV-K104P63124 156 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 PITPNAQ00169 270 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 PAX5Q02548 391 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TNFRSF9Q07011 255 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 LSAMPQ13449 338 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 KEAP1Q14145 624 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 MELKQ14680 651 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 SLC9A3R2Q15599 337 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 VAMP3Q15836 100 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TMEM249Q2WGJ8 235 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 LINGO2Q7L985 606 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 IGFN1Q86VF2 1251 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 ZNF433Q8N7K0 673 aaPredicted RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 ARIH2OSQ8N7S6 290 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TRMT10AQ8TBZ6 339 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 DNAJC9Q8WXX5 260 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TMEM54Q969K7 222 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 GTPBP3Q969Y2 492 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 FOXRED1Q96CU9 486 aaPredicted RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 COQ2Q96H96 371 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TSPAN32Q96QS1 320 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 PLA2G12AQ9BZM1 189 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 CTDSP1Q9GZU7 261 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 SEMA6AQ9H2E6 1030 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 TAS2R16Q9NYV7 291 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 GLTPQ9NZD2 209 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 OAZ3Q9UMX2 235 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 PRELID3BQ9Y3B1 194 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 SF3B6Q9Y3B4 125 aaKnown RBP7.16□□□□□ -1.26
CHD6-201ENST00000309279 KPTNQ9Y664 436 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 CDH10Q9Y6N8 788 aa7.16□□□□□ -1.26
CHD6-201ENST00000309279 HECTD1Q9ULT8 2610 aa7.15□□□□□ -1.26
CHD6-201ENST00000309279 ASH1LQ9NR48 2969 aaKnown RBP7.15□□□□□ -1.26
CHD6-201ENST00000309279 A0A1B0GV90 55 aa7.15□□□□□ -1.27
CHD6-201ENST00000309279 A1L4Q6 167 aa7.15□□□□□ -1.27
CHD6-201ENST00000309279 A6NIZ1 184 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms