RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ZNF529Q6P280 563 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 C5orf46Q6UWT4 87 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 FAM57BQ71RH2 274 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 GPBAR1Q8TDU6 330 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 CACFD1Q9UGQ2 172 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 MED12Q93074 2177 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 BRWD1Q9NSI6 2320 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 IGFBP4P22692 258 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 LAP3P28838 519 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 ABCA11PQ4W5N1 156 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 C1orf189Q5VU69 101 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 NAXEQ8NCW5 288 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 RNF133Q8WVZ7 376 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 DAZLQ92904 295 aaKnown RBP9.88□□□□□ -0.83
PTPN7-201ENST00000309017 GAS2L1Q99501 681 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-201ENST00000309017 PRRX2Q99811 253 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 SOX7Q9BT81 388 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.88□□□□□ -0.83
PTPN7-201ENST00000309017 AHCTF1Q8WYP5 2266 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 ALG1L2C9J202 215 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 XRCC2O43543 280 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 RAD51DO75771 328 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 IFNA17P01571 189 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 GABRR1P24046 479 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 S100A2P29034 98 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 GSK3AP49840 483 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 SUPT4H1P63272 117 aaKnown RBP9.88□□□□□ -0.83
PTPN7-201ENST00000309017 FAM189A2Q15884 450 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 VAX1Q5SQQ9 334 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 DEGS2Q6QHC5 323 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 OPN5Q6U736 354 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 C16orf47Q6ZP98 133 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-201ENST00000309017 H1FNTQ75WM6 255 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-201ENST00000309017 POC1AQ8NBT0 407 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 EMG1Q92979 244 aaKnown RBP9.88□□□□□ -0.83
PTPN7-201ENST00000309017 OR51M1Q9H341 326 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 WBP1LQ9NX94 342 aa9.88□□□□□ -0.83
PTPN7-201ENST00000309017 CNOT1A5YKK6 2376 aaKnown RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 TMEM14DPA8MWL7 114 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 SHISA8B8ZZ34 492 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 EIF1BO60739 113 aaKnown RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 C1QL1O75973 258 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 DIRAS3O95661 229 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 FCGR3AP08637 254 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 CD37P11049 281 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 CDAP32320 146 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 EIF2S3P41091 472 aaKnown RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 EIF1P41567 113 aaKnown RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 FXYD4P59646 89 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 C9orf152Q5JTZ5 239 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 C1orf53Q5VUE5 145 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 DMBX1Q8NFW5 382 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 ZNF2Q9BSG1 426 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 RTBDNQ9BSG5 229 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 MUC22E2RYF6 1773 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 UBE2CO00762 179 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 CLPSP04118 112 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 CD5P06127 495 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 GUCA1AP43080 201 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 FHITP49789 147 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 C14orf28Q4W4Y0 310 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 BTNL8Q6UX41 500 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 PPP1R3BQ86XI6 285 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 FAM213BQ8TBF2 198 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 ASB10Q8WXI3 467 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 PBDC1Q9BVG4 233 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 ZNF700Q9H0M5 742 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 CUTCQ9NTM9 273 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 FAM206AQ9NX38 181 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 ASH2LQ9UBL3 628 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 A0A0A6YYD4 124 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 ZNF708P17019 499 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 KIAA0141Q14154 515 aaPredicted RBP9.87□□□□□ -0.83
PTPN7-201ENST00000309017 SP6Q3SY56 376 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 LURAP1LQ8IV03 231 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 SLC22A18ASQ8N1D0 253 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 SLAMF9Q96A28 289 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 BCL2L14Q9BZR8 327 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 KCNIP3Q9Y2W7 256 aa9.87□□□□□ -0.83
PTPN7-201ENST00000309017 AP4M1O00189 453 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 SULT1A1P50225 295 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 TMEM50BP56557 158 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 ZNF121P58317 390 aaPredicted RBP9.86□□□□□ -0.83
PTPN7-201ENST00000309017 ACER2Q5QJU3 275 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 TMEM240Q5SV17 173 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 RPUSD3Q6P087 351 aaKnown RBP9.86□□□□□ -0.83
PTPN7-201ENST00000309017 PGAM5Q96HS1 289 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 GABRG3Q99928 467 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 FBRSQ9HAH7 460 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 PLEKHJ1Q9NW61 149 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 CYP8B1Q9UNU6 501 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 FIGNL2A6NMB9 653 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 ZNF850A8MQ14 1090 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 STMND1H3BQB6 276 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 SRSF10O75494 262 aaKnown RBP9.86□□□□□ -0.83
PTPN7-201ENST00000309017 CLN5O75503 358 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 ACKR3P25106 362 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 DCAF7P61962 342 aa9.86□□□□□ -0.83
PTPN7-201ENST00000309017 FOXK1P85037 733 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms