RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CYB5R3P00387 301 aaPredicted RBP9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 NRASP01111 189 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LIMS3P0CW19 117 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LIMS4P0CW20 117 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF20P17024 532 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CCL1P22362 96 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 KIR3DL2P43630 455 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ETV1P50549 477 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CCR9P51686 369 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 BTG1P62324 171 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF181Q2M3W8 571 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CEP78Q5JTW2 689 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CLVS2Q5SYC1 327 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 C6orf141Q5SZD1 244 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 FDX2Q6P4F2 183 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MOB3CQ70IA8 216 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LURAP1LQ8IV03 231 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MUC20Q8N307 709 aaPredicted RBP9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SPICQ8N5J4 248 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 OR14K1Q8NGZ2 314 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CLDND2Q8NHS1 167 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 Q8TCH9 128 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MYDGFQ969H8 173 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ITPKCQ96DU7 683 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RNF170Q96K19 258 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF184Q99676 751 aaPredicted RBP9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ISG20L2Q9H9L3 353 aaKnown RBP9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TRIM36Q9NQ86 728 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 C1orf123Q9NWV4 160 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 UBAP1Q9NZ09 502 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PSORS1C1Q9UIG5 152 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PCDHB10Q9UN67 800 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TPRKBQ9Y3C4 175 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 OTOGQ6ZRI0 2925 aa9.28□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 VPS13CQ709C8 3753 aa9.27□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF469Q96JG9 3925 aaPredicted RBP9.27□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TRBV2A0A0J9YWF9 115 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LOC100289279A0A1B0GTE1 492 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 A0A1B0GTI1 187 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR5B21A6NL26 309 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GATBO75879 557 aaKnown RBP9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 IGHV2-70P01814 119 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OCM2P0CE71 109 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OCMP0CE72 109 aaPredicted RBP9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 IGHV4-31P0DP07 118 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF16P17020 682 aaPredicted RBP9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MDH2P40926 338 aaKnown RBP9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TGM4P49221 684 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GPM6AP51674 278 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TAS2R43P59537 309 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GNG3P63215 75 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF154Q13106 437 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 MPPED2Q15777 294 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 KCNJ8Q15842 424 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR2G6Q5TZ20 316 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CYB5R2Q6BCY4 276 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR1M1Q8NGA1 313 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR13C3Q8NGS6 347 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR52N1Q8NH53 320 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR5AK2Q8NH90 309 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TSEN15Q8WW01 171 aaKnown RBP9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR5P3Q8WZ94 311 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 C10orf35Q96D05 121 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TECTBQ96PL2 329 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SMR3AQ99954 134 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF665Q9H7R5 613 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 GPR173Q9NS66 373 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 DCAF16Q9NXF7 216 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 FRRS1LQ9P0K9 344 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RNF7Q9UBF6 113 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 BLOC1S6Q9UL45 172 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 HHLA2Q9UM44 414 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SLC7A11Q9UPY5 501 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ERGIC3Q9Y282 383 aa9.27□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PPIAL4EA0A075B759 164 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ANKRD61A6NGH8 418 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ZNF732B4DXR9 585 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PTGES3LE9PB15 166 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PPIAL4DF5H284 164 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CD5LO43866 347 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PTBP3O95758 552 aaKnown RBP9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LY6G6DO95868 133 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 SERPINA3P01011 423 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 ISG15P05161 165 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CDK1P06493 297 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PPIAL4FP0DN26 164 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 WNT4P56705 351 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 NANOS3P60323 173 aaKnown RBP9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CNN3Q15417 329 aaKnown RBP9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CEACAM21Q3KPI0 293 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 CCDC58Q4VC31 144 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 TMEM155Q4W5P6 130 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 LAIR2Q6ISS4 152 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RPL22L1Q6P5R6 122 aaKnown RBP9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 Q6ZSR3 168 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 RDH10Q8IZV5 341 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 BOLLQ8N9W6 283 aaKnown RBP9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 OR5A2Q8NGI9 324 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 HPSE2Q8WWQ2 592 aa9.26□□□□□ -0.93
CSPG4P1Y-201ENST00000306641 PP6455Q8WZ26 134 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms