RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PRRT1Q99946 306 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 ZNF436Q9C0F3 470 aaPredicted RBP16.91■□□□□ 0.3
HOXC4-201ENST00000303406 DEFB127Q9H1M4 99 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 ZMAT3Q9HA38 289 aaKnown RBP16.91■□□□□ 0.3
HOXC4-201ENST00000303406 BEX1Q9HBH7 125 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 B3GNT2Q9NY97 397 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 SPRR3Q9UBC9 169 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 UBE2QL1A1L167 161 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 ZNF891A8MT65 544 aaPredicted RBP16.9■□□□□ 0.3
HOXC4-201ENST00000303406 MFNGO00587 321 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 CRTAPO75718 401 aaPredicted RBP16.9■□□□□ 0.3
HOXC4-201ENST00000303406 AMY2AP04746 511 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 ARR3P36575 388 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 ZP1P60852 638 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 RTP5Q14D33 572 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 PPA1Q15181 289 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 ACTBL2Q562R1 376 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 RNFT1Q5M7Z0 435 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 RTL6Q6ICC9 239 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 LHFPL2Q6ZUX7 228 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 MS4A3Q96HJ5 214 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 S100A13Q99584 98 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 SEC22CQ9BRL7 303 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 TMEM246Q9BRR3 403 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 NICN1Q9BSH3 213 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 IFT46Q9NQC8 304 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 GLRX2Q9NS18 164 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 ELF5Q9UKW6 265 aaPredicted RBP16.9■□□□□ 0.3
HOXC4-201ENST00000303406 PLEKHA6Q9Y2H5 1048 aa16.9■□□□□ 0.3
HOXC4-201ENST00000303406 TRAV17A0A0B4J275 112 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 TM4SF5O14894 197 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 SSX5O60225 188 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 VSIG10L2P0DP72 767 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 GNB3P16520 340 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 GNG2P59768 71 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 FAM3AP98173 230 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 SF3B4Q15427 424 aaKnown RBP eCLIP16.89■□□□□ 0.29
HOXC4-201ENST00000303406 RNASE10Q5GAN6 216 aaKnown RBP16.89■□□□□ 0.29
HOXC4-201ENST00000303406 TMEM53Q6P2H8 277 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 ASCL4Q6XD76 172 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 BPIFB2Q8N4F0 458 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 FDCSPQ8NFU4 85 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 OR2AE1Q8NHA4 323 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 TINAGL1Q9GZM7 467 aaPredicted RBP16.89■□□□□ 0.29
HOXC4-201ENST00000303406 DLL4Q9NR61 685 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 GPR173Q9NS66 373 aa16.89■□□□□ 0.29
HOXC4-201ENST00000303406 SLC22A20A6NK97 555 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 CEACAM4O75871 244 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 SNAPC5O75971 98 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 IGHV3-9P01782 118 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 GIPP09681 153 aaPredicted RBP16.88■□□□□ 0.29
HOXC4-201ENST00000303406 MGMTP16455 207 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 CPT2P23786 658 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 CCL11P51671 97 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 TMEM50BP56557 158 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 SLC22A6Q4U2R8 563 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 PLAC9Q5JTB6 97 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 IDO2Q6ZQW0 420 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 NUFIP2Q7Z417 695 aaKnown RBP16.88■□□□□ 0.29
HOXC4-201ENST00000303406 CPEB3Q8NE35 698 aaKnown RBP16.88■□□□□ 0.29
HOXC4-201ENST00000303406 NUDCD2Q8WVJ2 157 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 ASB13Q8WXK3 278 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 FAM210AQ96ND0 272 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 BANF2Q9H503 90 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 ZNF69Q9UC07 566 aa16.88■□□□□ 0.29
HOXC4-201ENST00000303406 ZNF816-ZNF321PA0A0X1KG74 233 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 OR14I1A6ND48 311 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 M0QYG6 137 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 SOCS1O15524 211 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 AGTR1P30556 359 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 C3AR1Q16581 482 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 LAMTOR1Q6IAA8 161 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 C9orf62Q8N4C0 152 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 ZDHHC22Q8N966 263 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 PIGTQ969N2 578 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 OCSTAMPQ9BR26 566 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 PLSCR3Q9NRY6 295 aa16.87■□□□□ 0.29
HOXC4-201ENST00000303406 TMEM82A0PJX8 343 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 SERPINE3A8MV23 424 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 SMLR1H3BR10 107 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 ZNF780AO75290 641 aaPredicted RBP16.86■□□□□ 0.29
HOXC4-201ENST00000303406 OR2A4O95047 310 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 NRASP01111 189 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 RLN1P04808 185 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 SERPINA5P05154 406 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 EDN3P14138 238 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 WT1P19544 449 aaPredicted RBP16.86■□□□□ 0.29
HOXC4-201ENST00000303406 MPGP29372 298 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 FUT6P51993 359 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 MTCP1P56278 107 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 ZNF92Q03936 586 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 SRSF6Q13247 344 aaKnown RBP16.86■□□□□ 0.29
HOXC4-201ENST00000303406 C1QL2Q7Z5L3 287 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 OR51T1Q8NGJ9 327 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 NPRL2Q8WTW4 380 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 POM121Q96HA1 1249 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 GMPPAQ96IJ6 420 aaPredicted RBP16.86■□□□□ 0.29
HOXC4-201ENST00000303406 RADILQ96JH8 1075 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 OR2A7Q96R45 310 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 SLC6A7Q99884 636 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms