RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SUMO3P55854 103 aaPredicted RBP21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 CRIP3Q6Q6R5 217 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 OR14K1Q8NGZ2 314 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 HPF1Q9NWY4 346 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 EXPH5Q8NEV8 1989 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 HPNP05981 417 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 GSTP1P09211 210 aaKnown RBP21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 GLI4P10075 376 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 FCGR2AP12318 317 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 ZNF837Q96EG3 531 aaPredicted RBP21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 GNRHR2Q96P88 292 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 ZNF385AQ96PM9 386 aaKnown RBP21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 UCN2Q96RP3 112 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 NMES1Q9C002 83 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 ZNF160Q9HCG1 818 aa21.44■■□□□ 1.02
SPTSSA-201ENST00000298130 A0A1W2PQM1 296 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 DCDP81605 110 aaKnown RBP21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 OR56B1Q8NGI3 324 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 CDC6Q99741 560 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 ZFAND5O76080 213 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 FARS2O95363 451 aaKnown RBP21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 PNLIPP16233 465 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 AFF3P51826 1226 aaKnown RBP21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 TAS2R31P59538 309 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 ACY1Q03154 408 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 CHAF1BQ13112 559 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 WDR74Q6RFH5 385 aaPredicted RBP21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 SPSB2Q99619 263 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 DEFB126Q9BYW3 111 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 SMIM3Q9BZL3 60 aa21.43■■□□□ 1.02
SPTSSA-201ENST00000298130 PTGFRP43088 359 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 BRICD5Q6PL45 260 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 CCDC36Q8IYA8 594 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 ESX1Q8N693 406 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 URM1Q9BTM9 101 aaKnown RBP21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 RBM24Q9BX46 236 aaKnown RBP21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 F8VVB4 439 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 F8VWA3 439 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 ANGPTL7O43827 346 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 SHBQ15464 509 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 AKIRIN2Q53H80 203 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 VAX1Q5SQQ9 334 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 RPL7L1Q6DKI1 246 aaKnown RBP21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 OR5L2Q8NGL0 311 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 OR6X1Q8NH79 312 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 OXGR1Q96P68 337 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 SEMA5BQ9P283 1151 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 FGF16O43320 207 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 FBXO24O75426 580 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 SERPINA5P05154 406 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 NFYBP25208 207 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 CCL7P80098 99 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 PABPC1L2AQ5JQF8 200 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 OR2A2Q6IF42 318 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 H3F3CQ6NXT2 135 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 HAGHLQ6PII5 290 aaPredicted RBP21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 DOK3Q7L591 496 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 C20orf196Q8IYI0 205 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 SLC39A7Q92504 469 aa21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 ZNF629Q9UEG4 869 aaPredicted RBP21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 PURGQ9UJV8 347 aaKnown RBP21.42■■□□□ 1.02
SPTSSA-201ENST00000298130 IGLV3-12A0A075B6K2 115 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 MBTPS2O43462 519 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 SCGNO76038 276 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 FAM157CP0CG43 387 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 PRKACAP17612 351 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 TBPP20226 339 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 NME2P22392 152 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 IL32P24001 234 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 NPBWR1P48145 328 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 ARRDC1Q8N5I2 433 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 OR2AE1Q8NHA4 323 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 MCTS1Q9ULC4 181 aaKnown RBP21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 RRADP55042 308 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 SLC30A7Q8NEW0 376 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 RNF141Q8WVD5 230 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 DYRK2Q92630 601 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 FBLN5Q9UBX5 448 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 PIGLQ9Y2B2 252 aa21.41■■□□□ 1.02
SPTSSA-201ENST00000298130 GSK3AP49840 483 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 MST1LQ2TV78 715 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 CHRFAM7AQ494W8 412 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 RABEPKQ7Z6M1 372 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 PECRQ9BY49 303 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 MOB1AQ9H8S9 216 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 ADAMTS9Q9P2N4 1935 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 DHRS7CA6NNS2 312 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 LRP3O75074 770 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 FPR2P25090 351 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 SCRN3Q0VDG4 424 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 BATF2Q8N1L9 274 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 SPACA9Q96E40 222 aaPredicted RBP21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 OCSTAMPQ9BR26 566 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 OCIAD1Q9NX40 245 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 RARRES3Q9UL19 164 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 OSGIN2Q9Y236 505 aa21.4■■□□□ 1.02
SPTSSA-201ENST00000298130 CACNA1EQ15878 2313 aa21.39■■□□□ 1.02
SPTSSA-201ENST00000298130 PMS2P1A4D2B8 440 aa21.39■■□□□ 1.02
SPTSSA-201ENST00000298130 CD79AP11912 226 aa21.39■■□□□ 1.02
SPTSSA-201ENST00000298130 PTGER4P35408 488 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms