RNA–Protein interactions for RNA: ENST00000292535.11

CUX1-201, Transcript of cut like homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUX1, Length 13,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-201ENST00000292535 C20orf24Q9BUV8 137 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 SLCO1C1Q9NYB5 712 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 HRO43593 1189 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 NDUFB3O43676 98 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 ZGLP1P0C6A0 271 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 ZBTB25P24278 435 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 PPIL1Q9Y3C6 166 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 A0A1W2PN81 502 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 CHRNA7P36544 502 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 RHOBP62745 196 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 TOMM34Q15785 309 aaPredicted RBP8.43□□□□□ -1.06
CUX1-201ENST00000292535 SFTPA2Q8IWL1 248 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 SFTPA1Q8IWL2 248 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 GAL3ST2Q9H3Q3 398 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 GFYI3L273 518 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 PCBP4P57723 403 aaKnown RBP8.43□□□□□ -1.06
CUX1-201ENST00000292535 ANKUB1A6NFN9 424 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 GPR31O00270 319 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 MICBQ29980 383 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 LIPNQ5VXI9 398 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 NUFIP2Q7Z417 695 aaKnown RBP8.43□□□□□ -1.06
CUX1-201ENST00000292535 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 GLRX2Q9NS18 164 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 HMGN4O00479 90 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 OR5R1Q8NH85 324 aa8.43□□□□□ -1.06
CUX1-201ENST00000292535 OR2T8A6NH00 312 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 TO15178 435 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 PPIHO43447 177 aaKnown RBP8.42□□□□□ -1.06
CUX1-201ENST00000292535 LGALS7P47929 136 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 GSG1Q2KHT4 349 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 RAB1BQ9H0U4 201 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 OR1L1Q8NH94 360 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 MS4A6EQ96DS6 147 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 MS4A4AQ96JQ5 239 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 PARP12Q9H0J9 701 aaKnown RBP8.42□□□□□ -1.06
CUX1-201ENST00000292535 LILRA5A6NI73 299 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 PHOX2AO14813 284 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 CLEC2DQ9UHP7 191 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 CBY3A6NI87 242 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 MPGP29372 298 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 NHLRC1Q6VVB1 395 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 SLC25A26Q70HW3 274 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 PELI3Q8N2H9 469 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 SLC25A4P12235 298 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 CD82P27701 267 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 BAK1Q16611 211 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 OR2B11Q5JQS5 317 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 TRAT1Q6PIZ9 186 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 SLCO4A1Q96BD0 722 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 C5P01031 1676 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 BTG2P78543 158 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 ARIH2OSQ8N7S6 290 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 MRGPRX3Q96LB0 322 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 EMC6Q9BV81 110 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 RHOFQ9HBH0 211 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 KMT2EQ8IZD2 1858 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 THBS4P35443 961 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 ZNF121P58317 390 aaPredicted RBP8.42□□□□□ -1.06
CUX1-201ENST00000292535 CCL7P80098 99 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 PRDX4Q13162 271 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 Q6ZSR9 355 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 FOXB1Q99853 325 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 UQCC2Q9BRT2 126 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 LMO7DNF2Z398 122 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 PTBP3O95758 552 aaKnown RBP8.42□□□□□ -1.06
CUX1-201ENST00000292535 SPEM1Q8N4L4 309 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 WDR31Q8NA23 367 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 OR6S1Q8NH40 331 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 GPR119Q8TDV5 335 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 PRRX2Q99811 253 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 CDCA4Q9BXL8 241 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 ICAM5Q9UMF0 924 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 DUS4LO95620 317 aaKnown RBP8.42□□□□□ -1.06
CUX1-201ENST00000292535 ADPRHL1Q8NDY3 354 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 CHST6Q9GZX3 395 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 TAAR3PQ9P1P4 343 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 NAGKQ9UJ70 344 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 C2CD3Q4AC94 2353 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 TJP1Q07157 1748 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 A0A1B0GUH1 482 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 RTN4IP1Q8WWV3 396 aaPredicted RBP8.42□□□□□ -1.06
CUX1-201ENST00000292535 C8orf44Q96CB5 159 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 ADGRG7Q96K78 797 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 TGIF2Q9GZN2 237 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 ACER3Q9NUN7 267 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 P4HTMQ9NXG6 502 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 A0A0A6YYJ9 748 aa8.42□□□□□ -1.06
CUX1-201ENST00000292535 ADAT1Q9BUB4 502 aaKnown RBP8.42□□□□□ -1.06
CUX1-201ENST00000292535 PIAS2O75928 621 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 C1QBP02746 253 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 PDGFAP04085 211 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TMPRSS11FQ6ZWK6 438 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 GALNT16Q8N428 558 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 OR2Z1Q8NG97 314 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 OR8B4Q96RC9 309 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 TRIM77I1YAP6 450 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 PLPP1O14494 284 aa8.41□□□□□ -1.06
CUX1-201ENST00000292535 NPPBP16860 134 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms