RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 DND1Q8IYX4 353 aaKnown RBP10.28□□□□□ -0.76
USP53-201ENST00000274030 GPR32P1Q8NGA4 272 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 EXTL1Q92935 676 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 IL20Q9NYY1 176 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 ATF1P18846 271 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 FUT6P51993 359 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 GSG1Q2KHT4 349 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 LILRA6Q6PI73 481 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 BHLHA9Q7RTU4 235 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 BAP18Q8IXM2 172 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 NIT2Q9NQR4 276 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 IGHV3-13P01766 116 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 IGHV3-7P01780 117 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 TRAPPC2P0DI81 140 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 TRAPPC2BP0DI82 140 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 RD3LP0DJH9 198 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 GNG10P50151 68 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 KIAA0040Q15053 153 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 FER1L6Q2WGJ9 1857 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 TSEN54Q7Z6J9 526 aaKnown RBP10.28□□□□□ -0.76
USP53-201ENST00000274030 MOB3BQ86TA1 216 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 DEFB124Q8NES8 71 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 OR5M8Q8NGP6 311 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 BTF3L4Q96K17 158 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 RCL1Q9Y2P8 373 aaKnown RBP10.28□□□□□ -0.76
USP53-201ENST00000274030 TERTO14746 1132 aaKnown RBP10.28□□□□□ -0.76
USP53-201ENST00000274030 CD37P11049 281 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 BMP5P22003 454 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 CTF1Q16619 201 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 SMIM21Q3B7S5 101 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 ADGRG3Q86Y34 549 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 ASXL3Q9C0F0 2248 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 SEC14L6B5MCN3 397 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 SLC17A2O00624 439 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 CISD3P0C7P0 127 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 CA6P23280 308 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 ZBTB25P24278 435 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 MPLP40238 635 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 FZD5Q13467 585 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 TIGITQ495A1 244 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 ZNF766Q5HY98 468 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 CBLN3Q6UW01 205 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 OR10AD1Q8NGE0 317 aa10.28□□□□□ -0.76
USP53-201ENST00000274030 APOBEC3DQ96AK3 386 aaPredicted RBP10.28□□□□□ -0.76
USP53-201ENST00000274030 PKD1L3Q7Z443 1732 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 A0A1B0GUH1 482 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 NKX2-2O95096 273 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 ONECUT2O95948 504 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 PRR35P0CG20 571 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 ACOT6Q3I5F7 207 aaPredicted RBP10.27□□□□□ -0.76
USP53-201ENST00000274030 STUMQ69YW2 141 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 ZNF774Q6NX45 483 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 LINC00299Q6ZSB3 139 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 SMIM4Q8WVI0 70 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 SMIM7Q9BQ49 75 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 AKIP1Q9NQ31 210 aa10.27□□□□□ -0.76
USP53-201ENST00000274030 IGHV1OR21-1A0A087WYE8 117 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 NCBP2LA6PVI3 153 aaKnown RBP10.27□□□□□ -0.77
USP53-201ENST00000274030 MPZL1O95297 269 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 TAS2R45P59539 299 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 TFF2Q03403 129 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 BTNL8Q6UX41 500 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 ADAT1Q9BUB4 502 aaKnown RBP10.27□□□□□ -0.77
USP53-201ENST00000274030 FAM60AQ9NP50 221 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 RYDENQ9NUL5 291 aaKnown RBP10.27□□□□□ -0.77
USP53-201ENST00000274030 ADRB1P08588 477 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 SUMO3P55854 103 aaPredicted RBP10.27□□□□□ -0.77
USP53-201ENST00000274030 C12orf73Q69YU5 71 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 ZNF547Q8IVP9 402 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 ZNF680Q8NEM1 530 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 OR2A5Q96R48 311 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 ALS2Q96Q42 1657 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 UBE2L5PA0A1B0GUS4 154 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 ZFPL1O95159 310 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 CT62P0C5K7 136 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 FGF7P21781 194 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 ARHGAP5-AS1Q96IT6 56 aa10.27□□□□□ -0.77
USP53-201ENST00000274030 ZNF768Q9H5H4 540 aaKnown RBP10.27□□□□□ -0.77
USP53-201ENST00000274030 M0R1X1 148 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 IL5P05113 134 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 LIMK1P53667 647 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 LRRTM1Q86UE6 522 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 PELI1Q96FA3 418 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 PLEKHA2Q9HB19 425 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 DNAJB12Q9NXW2 375 aaKnown RBP10.26□□□□□ -0.77
USP53-201ENST00000274030 IGLV3-16A0A075B6K0 115 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 ALX3O95076 343 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 PRICKLE4Q2TBC4 344 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 PLA1AQ53H76 456 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 OR13D1Q8NGV5 346 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 ALG14Q96F25 216 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 ITGB4P16144 1822 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 TRGV10A0A0A0MS01 117 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 TRAV1-2A0A0B4J238 106 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 LYZL6O75951 148 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 COX5AP20674 150 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 SLC37A1P57057 533 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 ACER2Q5QJU3 275 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms