RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 VRK3Q8IV63 474 aa14.34□□□□□ -0.11
UBR3-201ENST00000272793 TMEM183AQ8IXX5 376 aa14.34□□□□□ -0.11
UBR3-201ENST00000272793 PXNP49023 591 aaPredicted RBP14.34□□□□□ -0.11
UBR3-201ENST00000272793 RAB38P57729 211 aa14.34□□□□□ -0.11
UBR3-201ENST00000272793 NKAIN1Q4KMZ8 207 aa14.34□□□□□ -0.11
UBR3-201ENST00000272793 KTI12Q96EK9 354 aaPredicted RBP14.34□□□□□ -0.11
UBR3-201ENST00000272793 SIRT5Q9NXA8 310 aa14.34□□□□□ -0.11
UBR3-201ENST00000272793 SLAMF8Q9P0V8 285 aa14.34□□□□□ -0.11
UBR3-201ENST00000272793 PIPOXQ9P0Z9 390 aa14.34□□□□□ -0.11
UBR3-201ENST00000272793 MED13LQ71F56 2210 aa14.34□□□□□ -0.11
UBR3-201ENST00000272793 EIF1BO60739 113 aaKnown RBP14.33□□□□□ -0.11
UBR3-201ENST00000272793 FAM78BQ5VT40 261 aa14.33□□□□□ -0.11
UBR3-201ENST00000272793 PAAF1Q9BRP4 392 aa14.33□□□□□ -0.11
UBR3-201ENST00000272793 ABCA4P78363 2273 aa14.33□□□□□ -0.11
UBR3-201ENST00000272793 GPR3P46089 330 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 LGALS7P47929 136 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 RIGQ13278 110 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 PLPPR2Q96GM1 343 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 COX11Q9Y6N1 276 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 SETBP1Q9Y6X0 1596 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 A0A096LPE4 126 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 A0A1W2PPZ6 126 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 CCL5P13501 91 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 OTUD1Q5VV17 481 aaPredicted RBP14.33□□□□□ -0.12
UBR3-201ENST00000272793 ZFPM2Q8WW38 1151 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 USP22Q9UPT9 525 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 KRASP01116 189 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 CR2P20023 1033 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 ZBTB25P24278 435 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 ZNF385DQ9H6B1 395 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 TANC2Q9HCD6 1990 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 T-ENOLP0DO92 83 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 GALNT16Q8N428 558 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 MDGA1Q8NFP4 955 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 KCNE4Q8WWG9 221 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 PELI2Q9HAT8 420 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 ZFP30Q9Y2G7 519 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 FTH1P19P0C7X4 201 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 FGF8P55075 233 aaPredicted RBP14.33□□□□□ -0.12
UBR3-201ENST00000272793 HLA-BQ31612 363 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 ZPBPQ9BS86 351 aa14.33□□□□□ -0.12
UBR3-201ENST00000272793 PAFAH1B2P68402 229 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 DPPA3Q6W0C5 159 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 OR14A16Q8NHC5 309 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 ACTL6AO96019 429 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 CD1EP15812 388 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 CSF2RBP32927 897 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 SNRPEP62304 92 aaKnown RBP14.32□□□□□ -0.12
UBR3-201ENST00000272793 TP53INP2Q8IXH6 220 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 OR5AU1Q8NGC0 362 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 SLC25A33Q9BSK2 321 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 BICRAQ9NZM4 1560 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 LTN1O94822 1766 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 MGMTP16455 207 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 POLR2IP36954 125 aaKnown RBP14.32□□□□□ -0.12
UBR3-201ENST00000272793 ELFN2Q5R3F8 820 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 FAM24BQ8N5W8 94 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 ADTRPQ96IZ2 230 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 PPIHO43447 177 aaKnown RBP14.32□□□□□ -0.12
UBR3-201ENST00000272793 TEAD1P28347 426 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 SPANXN1Q5VSR9 72 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 CTRCQ99895 268 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 ACPTQ9BZG2 426 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 UNCXA6NJT0 531 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 ASCL1P50553 236 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 CMPK2Q5EBM0 449 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 AGBL4Q5VU57 503 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 FKBP11Q9NYL4 201 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 NTNG1Q9Y2I2 539 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 MCM3APO60318 1980 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 TRAV21A0A0B4J279 112 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 HIST1H1BP16401 226 aaKnown RBP14.32□□□□□ -0.12
UBR3-201ENST00000272793 B4GALT3O60512 393 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 ALDOCP09972 364 aaKnown RBP14.32□□□□□ -0.12
UBR3-201ENST00000272793 ST6GAL1P15907 406 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 SNRPNP63162 240 aaKnown RBP14.32□□□□□ -0.12
UBR3-201ENST00000272793 TMEFF1Q8IYR6 380 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 RNF113BQ8IZP6 322 aaKnown RBP14.32□□□□□ -0.12
UBR3-201ENST00000272793 OR6S1Q8NH40 331 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 SPACA5Q96QH8 159 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 WDR13Q9H1Z4 485 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 MMP26Q9NRE1 261 aa14.32□□□□□ -0.12
UBR3-201ENST00000272793 GPX3P22352 226 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 PPP1R1CQ8WVI7 109 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 CLDN23Q96B33 292 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 LHX3Q9UBR4 397 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 SYPL1Q16563 259 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 BSXQ3C1V8 233 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 HSF5Q4G112 596 aaPredicted RBP14.31□□□□□ -0.12
UBR3-201ENST00000272793 PARD6GQ9BYG4 376 aaPredicted RBP14.31□□□□□ -0.12
UBR3-201ENST00000272793 BTLAQ7Z6A9 289 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 SPPL3Q8TCT6 385 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 TNFRSF13CQ96RJ3 184 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 ERCC6L2Q5T890 1561 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.31□□□□□ -0.12
UBR3-201ENST00000272793 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.31□□□□□ -0.12
UBR3-201ENST00000272793 KCNJ10P78508 379 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 SNX22Q96L94 193 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 EMC6Q9BV81 110 aa14.31□□□□□ -0.12
UBR3-201ENST00000272793 FBXL17Q9UF56 701 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms