RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CRTAPO75718 401 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-201ENST00000269318 WISP2O76076 250 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 RAB3DO95716 219 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 CYB5AP00167 134 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 SULT1A3P0DMM9 295 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 SULT1A4P0DMN0 295 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 CXCL3P19876 107 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 ANXA7P20073 488 aaKnown RBP14.43□□□□□ -0.1
CCDC40-201ENST00000269318 RCVRNP35243 200 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 ZP1P60852 638 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 METTL11BQ5VVY1 283 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 SEZ6L2Q6UXD5 910 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 TRAPPC6BQ86SZ2 158 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 FAM89BQ8N5H3 189 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 NUDCD2Q8WVJ2 157 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 TNFAIP8L1Q8WVP5 186 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 GINS4Q9BRT9 223 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 COL25A1Q9BXS0 654 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-201ENST00000269318 CST11Q9H112 138 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 C12orf49Q9H741 205 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 CLCF1Q9UBD9 225 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 KCNK7Q9Y2U2 307 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 FOXI3A8MTJ6 420 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-201ENST00000269318 PROB1E7EW31 1015 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 XRCC2O43543 280 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 SSX5O60225 188 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 IL18BPO95998 194 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 IL5P05113 134 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 ZNF735P0CB33 412 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 GZMKP49863 264 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 TMEM50BP56557 158 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 RPS27AP62979 156 aaKnown RBP14.43□□□□□ -0.1
CCDC40-201ENST00000269318 IFITM2Q01629 132 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 FAM189A2Q15884 450 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 FBXW9Q5XUX1 488 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 ZNF584Q8IVC4 421 aa14.43□□□□□ -0.1
CCDC40-201ENST00000269318 TINAGL1Q9GZM7 467 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-201ENST00000269318 ZNF736B4DX44 427 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 M0QYG6 137 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 SS18L1O75177 396 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 GSTP1P09211 210 aaKnown RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 HIST1H1DP16402 221 aaKnown RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 OR3A2P47893 321 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 CNN3Q15417 329 aaKnown RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 CLVS2Q5SYC1 327 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 OR56B1Q8NGI3 324 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 RAB3CQ96E17 227 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 GMPPAQ96IJ6 420 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 SEC22CQ9BRL7 303 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 URM1Q9BTM9 101 aaKnown RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 PAIP2BQ9ULR5 123 aaKnown RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 ING4Q9UNL4 249 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 ARHGAP21Q5T5U3 1957 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 CFAP47Q6ZTR5 3102 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 IGKV1-27A0A075B6S5 117 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 SMLR1H3BR10 107 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 AQP7O14520 342 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 MGMTP16455 207 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 MPGP29372 298 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 ERP29P30040 261 aaKnown RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 ARR3P36575 388 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 MRPS15P82914 257 aaKnown RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 SLC36A1Q7Z2H8 476 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 OR4S1Q8NGB4 309 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 OR1K1Q8NGR3 316 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 DACT3Q96B18 629 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-201ENST00000269318 TM2D1Q9BX74 207 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 GVINP1Q7Z2Y8 2422 aa14.42□□□□□ -0.1
CCDC40-201ENST00000269318 MEIKINA0A087WXM9 373 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 MFNGO00587 321 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 SSNA1O43805 119 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 VSIG10L2P0DP72 767 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 CD79AP11912 226 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 PRKACBP22694 351 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 MTCP1P56278 107 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 RAB1AP62820 205 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 GVQW1Q8N7I0 195 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 OR10K1Q8NGX5 313 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 CAPSLQ8WWF8 208 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 BCL2L2Q92843 193 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-201ENST00000269318 ANAPC10Q9UM13 185 aa14.41□□□□□ -0.1
CCDC40-201ENST00000269318 C5orf49A4QMS7 147 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 SNRPGP15A8MWD9 76 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 NRASP01111 189 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 ANXA3P12429 323 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 ZNF626Q68DY1 528 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 ARHGAP5-AS1Q96IT6 56 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 CYYR1Q96J86 154 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 POM121L2Q96KW2 1035 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 PLSCR2Q9NRY7 297 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 GLRX2Q9NS18 164 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 ZNF222Q9UK12 451 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 NPTNQ9Y639 398 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 OR14I1A6ND48 311 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 FABP7O15540 132 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 RAD51DO75771 328 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 AMY2AP04746 511 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 CCL2P13500 99 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 SERPINA2P20848 420 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 MPZP25189 248 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms