RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 RBMXL1Q96E39 390 aaKnown RBP12.19□□□□□ -0.46
NPC1-201ENST00000269228 SUCNR1Q9BXA5 334 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 COPS3Q9UNS2 423 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 SMLR1H3BR10 107 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 TPPPO94811 219 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 CYC1P08574 325 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 PRDX4Q13162 271 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 ASAH1Q13510 395 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 CTF1Q16619 201 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 OR5H6Q8NGV6 325 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 OR13G1Q8NGZ3 307 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 APH1BQ8WW43 257 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 HAS2Q92819 552 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 TTTY12Q9BZ98 90 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 DCTDP32321 178 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 BAMBIQ13145 260 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 TMEM200AQ86VY9 491 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 FAM181AQ8N9Y4 354 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 NPEPL1Q8NDH3 523 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 RND1Q92730 232 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 NARFLQ9H6Q4 476 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 ZNF391Q9UJN7 358 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 ZNF236Q9UL36 1845 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 RNF150Q9ULK6 438 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 ACAA2P42765 397 aaKnown RBP12.19□□□□□ -0.46
NPC1-201ENST00000269228 RFX2P48378 723 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 PRSS53Q2L4Q9 553 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 XAF1Q6GPH4 301 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 CLDN23Q96B33 292 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 S1PR3Q99500 378 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 ZNF436Q9C0F3 470 aaPredicted RBP12.19□□□□□ -0.46
NPC1-201ENST00000269228 KCNJ16Q9NPI9 418 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 PPP1R14DQ9NXH3 145 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 KLK11Q9UBX7 282 aa12.19□□□□□ -0.46
NPC1-201ENST00000269228 CKAP5Q14008 2032 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 PPP1CBP62140 327 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 ARHGEF39Q8N4T4 335 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 SHARPINQ9H0F6 387 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 HS3ST3B1Q9Y662 390 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 ARID1AO14497 2285 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 MASP2O00187 686 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 FADS1O60427 444 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 BGLAPP02818 100 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 GUCA2AQ02747 115 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 EXTL1Q92935 676 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 CMBLQ96DG6 245 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 TMEM200CA6NKL6 621 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 FUT3P21217 361 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 UCNP55089 124 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 RAB4BP61018 213 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 RPS27AP62979 156 aaKnown RBP12.18□□□□□ -0.46
NPC1-201ENST00000269228 UBA52P62987 128 aaKnown RBP12.18□□□□□ -0.46
NPC1-201ENST00000269228 DBPQ10586 325 aaPredicted RBP12.18□□□□□ -0.46
NPC1-201ENST00000269228 OPCMLQ14982 345 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 ZNF674Q2M3X9 581 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 WDSUB1Q8N9V3 476 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 ADPRHL1Q8NDY3 354 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 UBALD1Q8TB05 177 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 ESRP2Q9H6T0 727 aaKnown RBP12.18□□□□□ -0.46
NPC1-201ENST00000269228 A0A0U1RQK1 487 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 XRCC3O43542 346 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 FGF9P31371 208 aaPredicted RBP12.18□□□□□ -0.46
NPC1-201ENST00000269228 BTG1P62324 171 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 EIF2S3LQ2VIR3 472 aaKnown RBP12.18□□□□□ -0.46
NPC1-201ENST00000269228 CDONQ4KMG0 1287 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 OR8G2PQ6IF36 304 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 HSD17B11Q8NBQ5 300 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 MARCH1Q8TCQ1 289 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 LIN37Q96GY3 246 aaPredicted RBP12.18□□□□□ -0.46
NPC1-201ENST00000269228 A0A0G2JMZ2 1700 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 LRRC37A2A6NM11 1700 aa12.18□□□□□ -0.46
NPC1-201ENST00000269228 PMP22Q01453 160 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 Q6ZNX1 250 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 C20orf196Q8IYI0 205 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 RBMXL3Q8N7X1 1067 aaKnown RBP12.17□□□□□ -0.46
NPC1-201ENST00000269228 MRM2Q9UI43 246 aaKnown RBP12.17□□□□□ -0.46
NPC1-201ENST00000269228 PTPRFP10586 1907 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 MEX3AA1L020 520 aaKnown RBP12.17□□□□□ -0.46
NPC1-201ENST00000269228 UBE2MP61081 183 aaKnown RBP12.17□□□□□ -0.46
NPC1-201ENST00000269228 NKX6-1P78426 367 aaPredicted RBP12.17□□□□□ -0.46
NPC1-201ENST00000269228 SSX1Q16384 188 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 BHLHA15Q7RTS1 189 aaPredicted RBP12.17□□□□□ -0.46
NPC1-201ENST00000269228 PTP4A1Q93096 173 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 PLPPR2Q96GM1 343 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 SLC26A1Q9H2B4 701 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 FLVCR2Q9UPI3 526 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 HLA-DOBP13765 273 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 PPP3CBP16298 524 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 KLF3P57682 345 aaPredicted RBP12.17□□□□□ -0.46
NPC1-201ENST00000269228 MICBQ29980 383 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 BTBD17A6NE02 478 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 C17orf112F2Z3M2 114 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
NPC1-201ENST00000269228 SPINK2P20155 84 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 AADACP22760 399 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 CRYBB2P43320 205 aa12.17□□□□□ -0.46
NPC1-201ENST00000269228 NKX2-1P43699 371 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms