RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 INPP1P49441 399 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 IDH3GP51553 393 aaPredicted RBP14.12□□□□□ -0.15
TPM1-201ENST00000267996 KLRB1Q12918 225 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 RFPL4BQ6ZWI9 263 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 MRPL21Q7Z2W9 205 aaKnown RBP14.12□□□□□ -0.15
TPM1-201ENST00000267996 PNLDC1Q8NA58 520 aaKnown RBP14.12□□□□□ -0.15
TPM1-201ENST00000267996 OR5L1Q8NGL2 311 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 OR52I2Q8NH67 350 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 NPRL2Q8WTW4 380 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 ZC3HAV1LQ96H79 300 aaKnown RBP14.12□□□□□ -0.15
TPM1-201ENST00000267996 GPER1Q99527 375 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 AUNIPQ9H7T9 357 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 PTTG3PQ9NZH4 202 aa14.12□□□□□ -0.15
TPM1-201ENST00000267996 TRAV18A0A075B6X5 111 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 OR5H1A6NKK0 313 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 MSTNO14793 375 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 LYRM1O43325 122 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 CST4P01036 141 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 IGLV1-44P01699 117 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 FAM157BP0CG42 384 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 ZP1P60852 638 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 MRPL49Q13405 166 aaKnown RBP14.11□□□□□ -0.15
TPM1-201ENST00000267996 DMRTC1Q5HYR2 192 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 ZNF57Q68EA5 555 aaPredicted RBP14.11□□□□□ -0.15
TPM1-201ENST00000267996 RAB12Q6IQ22 244 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 MZT2BQ6NZ67 158 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 CSNK2A3Q8NEV1 391 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 OR56B2PQ8NGI1 322 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 FCAMRQ8WWV6 532 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 PHF21AQ96BD5 680 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 WBP1Q96G27 269 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 NEDD4LQ96PU5 975 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 RBFOX1Q9NWB1 397 aaKnown RBP14.11□□□□□ -0.15
TPM1-201ENST00000267996 MYEF2Q9P2K5 600 aaKnown RBP14.11□□□□□ -0.15
TPM1-201ENST00000267996 KCNN3Q9UGI6 736 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 AMDHD2Q9Y303 409 aa14.11□□□□□ -0.15
TPM1-201ENST00000267996 METTL21EPA6NDL7 271 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 RAB27BO00194 218 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 ORC5O43913 435 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 PSMB1P20618 241 aaKnown RBP14.1□□□□□ -0.15
TPM1-201ENST00000267996 OPRM1P35372 400 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 MTCP1P56278 107 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 KLF9Q13886 244 aaPredicted RBP14.1□□□□□ -0.15
TPM1-201ENST00000267996 HLXQ14774 488 aaPredicted RBP14.1□□□□□ -0.15
TPM1-201ENST00000267996 LHFPL2Q6ZUX7 228 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 KCNG3Q8TAE7 436 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 GCDHQ92947 438 aaPredicted RBP14.1□□□□□ -0.15
TPM1-201ENST00000267996 FAM122AQ96E09 287 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 CPNE2Q96FN4 548 aaPredicted RBP14.1□□□□□ -0.15
TPM1-201ENST00000267996 NUDT16L1Q9BRJ7 211 aaKnown RBP14.1□□□□□ -0.15
TPM1-201ENST00000267996 PIGMQ9H3S5 423 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 CDH20Q9HBT6 801 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 SLC25A15Q9Y619 301 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 IGKV1-27A0A075B6S5 117 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 A0A0G2JNJ9 132 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 SMPD2O60906 423 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 SCGNO76038 276 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 PTHLHP12272 177 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 GDNFP39905 211 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 RBP2P50120 134 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 FUT6P51993 359 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 RBPJQ06330 500 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 DYRK1AQ13627 763 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 GPR176Q14439 515 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 RNASE12Q5GAN4 147 aaKnown RBP14.1□□□□□ -0.15
TPM1-201ENST00000267996 MTFR2Q6P444 385 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 ASCL4Q6XD76 172 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 C1QL2Q7Z5L3 287 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 CDH24Q86UP0 819 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 DUSP18Q8NEJ0 188 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 TNFAIP8L1Q8WVP5 186 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 PIGCQ92535 297 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 FAM46BQ96A09 425 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 LPAR5Q9H1C0 372 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 Q9UFV3 132 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 TINAGQ9UJW2 476 aa14.1□□□□□ -0.15
TPM1-201ENST00000267996 SPTA1P02549 2419 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 FUOMA2VDF0 154 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 CD300LBA8K4G0 201 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 A8MXE2 369 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 CDC14BO60729 498 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 AGFG2O95081 481 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 ZNF35P13682 527 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 KIR2DL3P43628 341 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 SRP9P49458 86 aaKnown RBP14.09□□□□□ -0.15
TPM1-201ENST00000267996 BCAP31P51572 246 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 MOGAT2Q3SYC2 334 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 C1QTNF12Q5T7M4 302 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 FBXW12Q6X9E4 464 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 MOB3CQ70IA8 216 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 TOMM5Q8N4H5 51 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 TMEM104Q8NE00 496 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 C7orf50Q9BRJ6 194 aaKnown RBP14.09□□□□□ -0.15
TPM1-201ENST00000267996 CRIM1Q9NZV1 1036 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 EIF3KQ9UBQ5 218 aaKnown RBP14.09□□□□□ -0.15
TPM1-201ENST00000267996 ZNF629Q9UEG4 869 aaPredicted RBP14.09□□□□□ -0.15
TPM1-201ENST00000267996 SLC7A11Q9UPY5 501 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 CACNG2Q9Y698 323 aa14.09□□□□□ -0.15
TPM1-201ENST00000267996 PRR14LQ5THK1 2151 aa14.08□□□□□ -0.16
TPM1-201ENST00000267996 MEIOCA2RUB1 952 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms