RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 SRPXP78539 464 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 MRPL49Q13405 166 aaKnown RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 TMEM92Q6UXU6 159 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 C17orf78Q8N4C9 275 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 INTS12Q96CB8 462 aaKnown RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 RAB33BQ9H082 229 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 LOC102725191A0A1B0GVB3 256 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 HSPB2A8KAH6 182 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 MPZL1O95297 269 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 CRHP06850 196 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 HOXD4P09016 255 aaPredicted RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 HSPB2Q16082 182 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF684Q5T5D7 378 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 RGS7BPQ6MZT1 257 aaPredicted RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 CD200R1LQ6Q8B3 271 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 ARRDC1Q8N5I2 433 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 ZDHHC22Q8N966 263 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 TMEM52Q8NDY8 209 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 GJC3Q8NFK1 279 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 EDAQ92838 391 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 TXN2Q99757 166 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 TMPRSS13Q9BYE2 586 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 GDF2Q9UK05 429 aaPredicted RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 OSGIN2Q9Y236 505 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 TMEM184BQ9Y519 407 aaPredicted RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 CHD5Q8TDI0 1954 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 SCN4AP35499 1836 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 C7orf77A4D0Y5 90 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 DUS4LO95620 317 aaKnown RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 EIF1P41567 113 aaKnown RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 ANKRD9Q96BM1 317 aaPredicted RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 ANKRD10Q9NXR5 420 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 DOCK6Q96HP0 2047 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 TUSC2O75896 110 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 PDGFBP01127 241 aaPredicted RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 MSR1P21757 451 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 CDAP32320 146 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 NANOS3P60323 173 aaKnown RBP10.34□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF117Q03924 483 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 PDCD1Q15116 288 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 FAM185AQ8N0U4 392 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 AGBL5Q8NDL9 886 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 OR52N4Q8NGI2 321 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 ARV1Q9H2C2 271 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 SPTA1P02549 2419 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 A0A1W2PPE2 198 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 PLSCR5A0PG75 271 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 AP4M1O00189 453 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 RAB27BO00194 218 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ABCD4O14678 606 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 EFSO43281 561 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 IGHV3-9P01782 118 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 CD63P08962 238 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 GSTP1P09211 210 aaKnown RBP10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ZGLP1P0C6A0 271 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 FAHP16930 419 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 HOXB9P17482 250 aaPredicted RBP10.33□□□□□ -0.76
VPS33A-201ENST00000267199 PSMB3P49720 205 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF133P52736 654 aaPredicted RBP10.33□□□□□ -0.76
VPS33A-201ENST00000267199 CA5BP1Q8WTZ4 195 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 LIPHQ8WWY8 451 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ST8SIA1Q92185 356 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 LHX4Q969G2 390 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 SMIM7Q9BQ49 75 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ST6GALNAC2Q9UJ37 374 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 TRAPPC2LQ9UL33 140 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 CEP250Q9BV73 2442 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 SIP14410 1827 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 IGHV5-51A0A0C4DH38 117 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 F10P00742 488 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 IL2RGP31785 369 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ECI1P42126 302 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 RNF4P78317 190 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 FZD2Q14332 565 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF141Q15928 474 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF429Q86V71 674 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 SFTPA2Q8IWL1 248 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 DTWD2Q8NBA8 298 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ZPLD1Q8TCW7 415 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 TRIOBPQ9H2D6 2365 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ZDBF2Q9HCK1 2354 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 MDFIC2A0A1B0GVS7 189 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 K7EQS6 105 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 GPR37O15354 613 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 TMEM127O75204 238 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF121P58317 390 aaPredicted RBP10.33□□□□□ -0.76
VPS33A-201ENST00000267199 HYAL1Q12794 435 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 SPANXN5Q5MJ07 72 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 NPEPL1Q8NDH3 523 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 GPBAR1Q8TDU6 330 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 TMEM37Q8WXS4 190 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 TMEM68Q96MH6 324 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 OPA3Q9H6K4 179 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 CNTD2Q9H8S5 307 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 GHRLQ9UBU3 117 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 RCL1Q9Y2P8 373 aaKnown RBP10.33□□□□□ -0.76
VPS33A-201ENST00000267199 DOCK4Q8N1I0 1966 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 IGHV3-64DA0A0J9YX35 117 aa10.33□□□□□ -0.76
VPS33A-201ENST00000267199 FTCDNL1E5RQL4 147 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms