RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 FAM221AA4D161 298 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 ANKUB1A6NFN9 424 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 CDC14BO60729 498 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 LRP3O75074 770 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 RAD51DO75771 328 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 ISG15P05161 165 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 TMEM225BP0DP42 221 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 FAHP16930 419 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 RCC1P18754 421 aaPredicted RBP11.18□□□□□ -0.62
LIG1-201ENST00000263274 ANOS1P23352 680 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 TAS2R31P59538 309 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 FAM76BQ5HYJ3 339 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 BRICD5Q6PL45 260 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 MVB12AQ96EY5 273 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 C5orf66Q9H5L9 145 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 TINAGQ9UJW2 476 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 C14orf166Q9Y224 244 aaKnown RBP11.18□□□□□ -0.62
LIG1-201ENST00000263274 FLVCR1Q9Y5Y0 555 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 LHFPL6Q9Y693 200 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 C5orf63A6NC05 138 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 LIPT2A6NK58 231 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 CHRM2P08172 466 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 ACAA1P09110 424 aaPredicted RBP11.18□□□□□ -0.62
LIG1-201ENST00000263274 CD80P33681 288 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 OPRM1P35372 400 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 LTBRP36941 435 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 TMEM50BP56557 158 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 IAH1Q2TAA2 248 aaPredicted RBP11.18□□□□□ -0.62
LIG1-201ENST00000263274 RPL7L1Q6DKI1 246 aaKnown RBP11.18□□□□□ -0.62
LIG1-201ENST00000263274 DRAM2Q6UX65 266 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 C1QL2Q7Z5L3 287 aa11.18□□□□□ -0.62
LIG1-201ENST00000263274 A0A0A6YYD4 124 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ST8SIA5O15466 376 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 NPBWR1P48145 328 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 PDZK1IP1Q13113 114 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 SP6Q3SY56 376 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 C5orf46Q6UWT4 87 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 EIF4E3Q8N5X7 224 aaKnown RBP11.17□□□□□ -0.62
LIG1-201ENST00000263274 DTWD2Q8NBA8 298 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 SLC38A9Q8NBW4 561 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 OR56B1Q8NGI3 324 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 OR6S1Q8NH40 331 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ASB13Q8WXK3 278 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ST8SIA1Q92185 356 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 DEFB126Q9BYW3 111 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 PLEKHJ1Q9NW61 149 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 B3GALT5Q9Y2C3 310 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ANGPTL7O43827 346 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 EFNA2O43921 213 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 CRYBA1P05813 215 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 FOSL2P15408 326 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ZNF616Q08AN1 781 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 NKAIN1Q4KMZ8 207 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 PHF19Q5T6S3 580 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 DEGS2Q6QHC5 323 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 C20orf196Q8IYI0 205 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
LIG1-201ENST00000263274 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 BARX1Q9HBU1 254 aaPredicted RBP11.17□□□□□ -0.62
LIG1-201ENST00000263274 FAM230AA0A1W2PPH8 454 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ZNF814B7Z6K7 855 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 SLC33A1O00400 549 aaPredicted RBP11.17□□□□□ -0.62
LIG1-201ENST00000263274 SRSF10O75494 262 aaKnown RBP11.17□□□□□ -0.62
LIG1-201ENST00000263274 MELTFP08582 738 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 PDCD1Q15116 288 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 TSC22D1Q15714 1073 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 PGAP1Q75T13 922 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 C6orf201Q7Z4U5 140 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 NECAB3Q96P71 396 aaPredicted RBP11.17□□□□□ -0.62
LIG1-201ENST00000263274 PRDM6Q9NQX0 595 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ALKBH4Q9NXW9 302 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 PLEK2Q9NYT0 353 aa11.17□□□□□ -0.62
LIG1-201ENST00000263274 ZNF850A8MQ14 1090 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 TLX3O43711 291 aaPredicted RBP11.16□□□□□ -0.62
LIG1-201ENST00000263274 PPT1P50897 306 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 NUBP1P53384 320 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 CEBPGP53567 150 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 SMAD4Q13485 552 aaKnown RBP11.16□□□□□ -0.62
LIG1-201ENST00000263274 THEM4Q5T1C6 240 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 AVPI1Q5T686 147 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 HOGA1Q86XE5 327 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 PHYHIPLQ96FC7 376 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 C20orf24Q9BUV8 137 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 FAM117AQ9C073 453 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 AHCTF1Q8WYP5 2266 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 OR5H15A6NDH6 313 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 PIAS2O75928 621 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 PRH1P02810 166 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 CSTBP04080 98 aaKnown RBP11.16□□□□□ -0.62
LIG1-201ENST00000263274 KISS1Q15726 138 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 SCGB3A2Q96PL1 93 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 RHOFQ9HBH0 211 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 TAF9BQ9HBM6 251 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 SCRG1O75711 98 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 SCGNO76038 276 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 SNAPINO95295 136 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 TIAF1O95411 115 aa11.16□□□□□ -0.62
LIG1-201ENST00000263274 SFT2D2O95562 160 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms