RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ZNF850A8MQ14 1090 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 ACOT8O14734 319 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 LHBP01229 141 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 PRDX4Q13162 271 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 PDLIM3Q53GG5 364 aaPredicted RBP10.11□□□□□ -0.79
TRAF4-202ENST00000262396 WDR82Q6UXN9 313 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 THAP5Q7Z6K1 395 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 ZDHHC23Q8IYP9 409 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 GALNT4Q8N4A0 578 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 ZNF454Q8N9F8 522 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 NPRL2Q8WTW4 380 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 RNF133Q8WVZ7 376 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 RPL3LQ92901 407 aaKnown RBP10.11□□□□□ -0.79
TRAF4-202ENST00000262396 CCDC124Q96CT7 223 aaKnown RBP10.11□□□□□ -0.79
TRAF4-202ENST00000262396 HAO2Q9NYQ3 351 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 LAMP5Q9UJQ1 280 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 DOCK11Q5JSL3 2073 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 MEIOCA2RUB1 952 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 H0YAE9 185 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 GSC2O15499 205 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 AKR7A2O43488 359 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 HMGN1P05114 100 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 RAP2AP10114 183 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 PSKH1P11801 424 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 GLRA1P23415 457 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 IER3P46695 156 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 GYS2P54840 703 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 TRIM25Q14258 630 aaKnown RBP10.1□□□□□ -0.79
TRAF4-202ENST00000262396 GK3PQ14409 553 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 ZNF770Q6IQ21 691 aaPredicted RBP10.1□□□□□ -0.79
TRAF4-202ENST00000262396 PLBD1Q6P4A8 553 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 TMEM185AQ8NFB2 350 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 FEVQ99581 238 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 PKP2Q99959 881 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 NIPSNAP1Q9BPW8 284 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 NMNAT2Q9BZQ4 307 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 MMP27Q9H306 513 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 NIPAL2Q9H841 368 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 PDP1Q9P0J1 537 aaPredicted RBP10.1□□□□□ -0.79
TRAF4-202ENST00000262396 SLC25A10Q9UBX3 287 aaPredicted RBP10.1□□□□□ -0.79
TRAF4-202ENST00000262396 GTF2A1LQ9UNN4 478 aa10.1□□□□□ -0.79
TRAF4-202ENST00000262396 A0A1B0GW55 424 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 A0A1W2PPH5 198 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 NPFFO15130 113 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DUX4L2P0CJ85 424 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DUX4L3P0CJ86 424 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DUX4L4P0CJ87 422 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DUX4L5P0CJ88 424 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DUX4L6P0CJ89 424 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DUX4L7P0CJ90 424 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 OPRL1P41146 370 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 MAGEA2P43356 314 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 MAP2K3P46734 347 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 GPM6AP51674 278 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 PRB3Q04118 309 aaPredicted RBP10.09□□□□□ -0.79
TRAF4-202ENST00000262396 GINS1Q14691 196 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 TAF9Q16594 264 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 NCR3LG1Q68D85 454 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 LCN8Q6JVE9 175 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 KCTD18Q6PI47 426 aaPredicted RBP10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DUX4L9Q6RFH8 374 aaPredicted RBP10.09□□□□□ -0.79
TRAF4-202ENST00000262396 LDLRAD3Q86YD5 345 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 FAM185AQ8N0U4 392 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 FGFRL1Q8N441 504 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 OR10Z1Q8NGY1 313 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 LINC01006Q8NI28 216 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 ZNF671Q8TAW3 534 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 SEH1LQ96EE3 360 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DCTN5Q9BTE1 182 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 CHID1Q9BWS9 393 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 FAM234AQ9H0X4 552 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DNTTIP1Q9H147 329 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 SEMA6AQ9H2E6 1030 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 YY1AP1Q9H869 796 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 NLKQ9UBE8 527 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 DUX4Q9UBX2 424 aa10.09□□□□□ -0.79
TRAF4-202ENST00000262396 ZNF816-ZNF321PA0A0X1KG74 233 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 SELENOFO60613 162 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 CALB2P22676 271 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 ANOS1P23352 680 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 TGFBR2P37173 567 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 ELF3P78545 371 aaPredicted RBP10.08□□□□□ -0.8
TRAF4-202ENST00000262396 CBX1P83916 185 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 RELBQ01201 579 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 LINC01590Q5TEZ4 76 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 MOB3CQ70IA8 216 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 RHOUQ7L0Q8 258 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 PIGWQ7Z7B1 504 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 WDR86Q86TI4 376 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 C11orf53Q8IXP5 236 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 OR51G2Q8NGK0 314 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 OR5R1Q8NH85 324 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 OTOSQ8NHW6 89 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 FAM110DQ8TAY7 271 aaPredicted RBP10.08□□□□□ -0.8
TRAF4-202ENST00000262396 OR5P3Q8WZ94 311 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 ITPKCQ96DU7 683 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 DMRTB1Q96MA1 342 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 CITED1Q99966 193 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 RBM4BQ9BQ04 359 aaKnown RBP10.08□□□□□ -0.8
TRAF4-202ENST00000262396 MROQ9BYG7 248 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms