RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 JAM3Q9BX67 310 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 ZNF716A6NP11 495 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 SHISA8B8ZZ34 492 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 GFYI3L273 518 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 PPICP45877 212 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 GUCA2AQ02747 115 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 SPINK9Q5DT21 86 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 ASB16Q96NS5 453 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 LSM2Q9Y333 95 aaKnown RBP12.88□□□□□ -0.35
CUX2-201ENST00000261726 CDC14BO60729 498 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 GP2P55259 537 aaKnown RBP12.88□□□□□ -0.35
CUX2-201ENST00000261726 ZNF77Q15935 545 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.88□□□□□ -0.35
CUX2-201ENST00000261726 ST8SIA1Q92185 356 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 IP6K3Q96PC2 410 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 ADAT1Q9BUB4 502 aaKnown RBP12.88□□□□□ -0.35
CUX2-201ENST00000261726 LTB4R2Q9NPC1 389 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 MMP17Q9ULZ9 603 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 CDK5RAP2Q96SN8 1893 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 SDK1Q7Z5N4 2213 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 KRASP01116 189 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 FOXF1Q12946 379 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 ZNF574Q6ZN55 896 aaPredicted RBP12.88□□□□□ -0.35
CUX2-201ENST00000261726 OR2M3Q8NG83 312 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 CLDN23Q96B33 292 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 IFITM5A6NNB3 132 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 CIDEAO60543 219 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 OR5AL1P0C617 328 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 FZD2Q14332 565 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 C19orf35Q6ZS72 473 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 CRYGNQ8WXF5 182 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 KIAA1551Q9HCM1 1747 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 PDE4DIPQ5VU43 2346 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 PPIHO43447 177 aaKnown RBP12.87□□□□□ -0.35
CUX2-201ENST00000261726 GPANK1O95872 356 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 EPHA2P29317 976 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 OR11G2Q8NGC1 345 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 PPP1R1CQ8WVI7 109 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 SMIM12Q96EX1 92 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 S100A8P05109 93 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 GFERP55789 205 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 ETFDHQ16134 617 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 TCTN3Q6NUS6 607 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 BTLAQ7Z6A9 289 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 SMIM19Q96E16 107 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 MYO18AQ92614 2054 aaKnown RBP12.87□□□□□ -0.35
CUX2-201ENST00000261726 OR2W5A6NFC9 320 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 SLC16A12Q6ZSM3 486 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 OR4F17Q8NGA8 305 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 FAM90A27PA6NNH2 459 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 H0YIG0 161 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 NEURL1O76050 574 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
CUX2-201ENST00000261726 ZNF83P51522 516 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 AGERQ15109 404 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 FFAR4Q5NUL3 377 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 TOMM20LQ6UXN7 152 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 MRGPRX4Q96LA9 322 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 TMEM9BQ9NQ34 198 aa12.87□□□□□ -0.35
CUX2-201ENST00000261726 PRRT4C9JH25 899 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 MYPOPQ86VE0 399 aaPredicted RBP12.86□□□□□ -0.35
CUX2-201ENST00000261726 GPNMBQ14956 572 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 CEACAM16Q2WEN9 425 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 AFMIDQ63HM1 303 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 ETFRF1Q6IPR1 90 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 PLA2G3Q9NZ20 509 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 CCDC187A0A096LP49 1063 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 H3BMH7 237 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 AKR7A2O43488 359 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 NQO2P16083 231 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 ARRB2P32121 409 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 PPP2CBP62714 309 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 PPP2CAP67775 309 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 FAM26EQ8N5C1 309 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 OR4A4PQ8NGN8 299 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 OR2V1Q8NHB1 315 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 DOK5Q9P104 306 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 ST8SIA5O15466 376 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 ATF1P18846 271 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 CD200P41217 278 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 FUT6P51993 359 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 BAP18Q8IXM2 172 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 NOXO1Q8NFA2 376 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 C12orf57Q99622 126 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 TRAV34A0A0B4J273 112 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 TMEM30CPA0ZSE6 113 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 NPY1RP25929 384 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 CEACAM6P40199 344 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 ISL1P61371 349 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 CCL7P80098 99 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 RPEQ96AT9 228 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 CBY1Q9Y3M2 126 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 ADAMTSL1Q8N6G6 1762 aa12.86□□□□□ -0.35
CUX2-201ENST00000261726 TOX3O15405 576 aaPredicted RBP12.85□□□□□ -0.35
CUX2-201ENST00000261726 KLK10O43240 276 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 NOVP48745 357 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 PLPP6Q8IY26 295 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 WDR89Q96FK6 387 aaPredicted RBP12.85□□□□□ -0.35
CUX2-201ENST00000261726 TMPRSS13Q9BYE2 586 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms