RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GON7Q9BXV9 100 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 RAB1BQ9H0U4 201 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 MS4A5Q9H3V2 200 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 TUBG2Q9NRH3 451 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 PLSCR3Q9NRY6 295 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 SLCO1C1Q9NYB5 712 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 STARD10Q9Y365 291 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 ALG5Q9Y673 324 aa14.35□□□□□ -0.11
SDCBP-201ENST00000260130 J3QW42 95 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 ORC5O43913 435 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 RGS9O75916 674 aaPredicted RBP14.34□□□□□ -0.11
SDCBP-201ENST00000260130 IGHV3-13P01766 116 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 EIF2B1Q14232 305 aaKnown RBP14.34□□□□□ -0.11
SDCBP-201ENST00000260130 MBNL2Q5VZF2 373 aaKnown RBP14.34□□□□□ -0.11
SDCBP-201ENST00000260130 ZCCHC24Q8N2G6 241 aaKnown RBP14.34□□□□□ -0.11
SDCBP-201ENST00000260130 SPTSSAQ969W0 71 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 SLAMF6Q96DU3 332 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 SORCS2Q96PQ0 1159 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 KCNJ15Q99712 375 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 BEX2Q9BXY8 128 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 ING3Q9NXR8 418 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 TAAR3PQ9P1P4 343 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 GPR160Q9UJ42 338 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 ZNF469Q96JG9 3925 aaPredicted RBP14.34□□□□□ -0.11
SDCBP-201ENST00000260130 SELENOFO60613 162 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 NCR1O76036 304 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 F12P00748 615 aaPredicted RBP14.34□□□□□ -0.11
SDCBP-201ENST00000260130 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 MTNR1BP49286 362 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 KLBQ86Z14 1044 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 ZFAND1Q8TCF1 268 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 APOBEC3DQ96AK3 386 aaPredicted RBP14.34□□□□□ -0.11
SDCBP-201ENST00000260130 Q96MF0 132 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 MARVELD1Q9BSK0 173 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 NIPAL2Q9H841 368 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 CENPMQ9NSP4 180 aa14.34□□□□□ -0.11
SDCBP-201ENST00000260130 ALX3O95076 343 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 ACSM4P0C7M7 580 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 MPV17P39210 176 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 RAB25P57735 213 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 NKPD1Q17RQ9 610 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 CLEC12BQ2HXU8 276 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 MEPCEQ7L2J0 689 aaKnown RBP14.33□□□□□ -0.11
SDCBP-201ENST00000260130 YIPF7Q8N8F6 280 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 ABHD6Q9BV23 337 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 ACOXLQ9NUZ1 547 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 NLKQ9UBE8 527 aa14.33□□□□□ -0.11
SDCBP-201ENST00000260130 ZNF878C9JN71 531 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 ERCC1P07992 297 aaPredicted RBP14.33□□□□□ -0.12
SDCBP-201ENST00000260130 NAA10P41227 235 aaPredicted RBP14.33□□□□□ -0.12
SDCBP-201ENST00000260130 TAF13Q15543 124 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 COLCA1Q6ZS62 124 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 NAA40Q86UY6 237 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 ACBD7Q8N6N7 88 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 ZNF454Q8N9F8 522 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 OR5L1Q8NGL2 311 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 OTOSQ8NHW6 89 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 C1QTNF5Q9BXJ0 243 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 POFUT1Q9H488 388 aa14.33□□□□□ -0.12
SDCBP-201ENST00000260130 HIVEP1P15822 2718 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 ARFGEF3Q5TH69 2177 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 SHISA3A0PJX4 238 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 J3QRE1 110 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 M0R135 149 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 C1QBP02746 253 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 OTX1P32242 354 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-201ENST00000260130 ALKBH6Q3KRA9 238 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 ZNF57Q68EA5 555 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-201ENST00000260130 TMEM91Q6ZNR0 172 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 RHOUQ7L0Q8 258 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 OR51G2Q8NGK0 314 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 NEU4Q8WWR8 484 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-201ENST00000260130 ZNF799Q96GE5 643 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 SLC22A31A6NKX4 558 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 LY6HO94772 140 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 NAT2P11245 290 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 TALDO1P37837 337 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 GZMKP49863 264 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 PSG7Q13046 419 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 TNK1Q13470 666 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 DNM1P46Q6ZS02 220 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 SLC16A9Q7RTY1 509 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 THEM6Q8WUY1 208 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 SNX33Q8WV41 574 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 RNF133Q8WVZ7 376 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 CREB3L1Q96BA8 519 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 KCTD12Q96CX2 325 aaKnown RBP14.32□□□□□ -0.12
SDCBP-201ENST00000260130 CMBLQ96DG6 245 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 AMELYQ99218 206 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 BABAM2Q9NXR7 383 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 EXTL2Q9UBQ6 330 aa14.32□□□□□ -0.12
SDCBP-201ENST00000260130 LCATP04180 440 aa14.31□□□□□ -0.12
SDCBP-201ENST00000260130 RRAS2P62070 204 aaPredicted RBP14.31□□□□□ -0.12
SDCBP-201ENST00000260130 TRAM1Q15629 374 aa14.31□□□□□ -0.12
SDCBP-201ENST00000260130 TMEM255AQ5JRV8 349 aa14.31□□□□□ -0.12
SDCBP-201ENST00000260130 DRAM2Q6UX65 266 aa14.31□□□□□ -0.12
SDCBP-201ENST00000260130 LRRC28Q86X40 367 aaPredicted RBP14.31□□□□□ -0.12
SDCBP-201ENST00000260130 UPRTQ96BW1 309 aa14.31□□□□□ -0.12
SDCBP-201ENST00000260130 ALG8Q9BVK2 526 aa14.31□□□□□ -0.12
SDCBP-201ENST00000260130 TMUB1Q9BVT8 246 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms