RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 YIF1AO95070 293 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 LGALS7P47929 136 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 ETFDHQ16134 617 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 ANKRD34AQ69YU3 496 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF285Q96NJ3 590 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 CRYM-AS1A6NIL9 109 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 S100A1P23297 94 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 PLA2G7Q13093 441 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 MPV17LQ2QL34 196 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 MAVSQ7Z434 540 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 ST3GAL6Q9Y274 331 aa11.9□□□□□ -0.5
PRPF38A-201ENST00000257181 SCN1AP35498 2009 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 SOX15O60248 233 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 CT62P0C5K7 136 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 ZNF136P52737 540 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 ACSM1Q08AH1 577 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 PEAR1Q5VY43 1037 aaPredicted RBP11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 UBE3DQ7Z6J8 389 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 ZBTB34Q8NCN2 500 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 CNTNAP3BQ96NU0 1288 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 FGF2P09038 288 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 AKIRIN2Q53H80 203 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 OR2T2Q6IF00 324 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 SH2D5Q6ZV89 423 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 NIPSNAP1Q9BPW8 284 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 OR51E2Q9H255 320 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 SEBOXQ9HB31 216 aaPredicted RBP11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 MRPS18BQ9Y676 258 aaKnown RBP11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 OOEPA6NGQ2 149 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 TXNL1O43396 289 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 SLC2A10O95528 541 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 GFRA1P56159 465 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 SYT6Q5T7P8 510 aaPredicted RBP11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 KCNIP4Q6PIL6 250 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 OR6Q1Q8NGQ2 317 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 GPX8Q8TED1 209 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 MGAMO43451 1857 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 TMEM82A0PJX8 343 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 BGLAPP02818 100 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 DTYMKP23919 212 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM209BQ5JX69 171 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 NCR3LG1Q68D85 454 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 OR2G2Q8NGZ5 317 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 OR2M2Q96R28 347 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
PRPF38A-201ENST00000257181 GPR37O15354 613 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 NGFP01138 241 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 OR5H8P0DN80 308 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 APEX1P27695 318 aaKnown RBP11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 GPM6AP51674 278 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM27BQ5VT28 67 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 GCSAMQ8N6F7 178 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 FDCSPQ8NFU4 85 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 TSPAN32Q96QS1 320 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 GSTZ1O43708 216 aaPredicted RBP11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 SYNGR3O43761 229 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 MBP02144 154 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 S100A6P06703 90 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 TNFSF10P50591 281 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 HMGA2P52926 109 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 B3GLCTQ6Y288 498 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 OR5R1Q8NH85 324 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 GZMKP49863 264 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 WNT3P56703 355 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 NSUN5P2Q63ZY6 315 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 ZNF774Q6NX45 483 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 PLPP7Q8NBV4 271 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 OR1S2Q8NGQ3 325 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 VWCEQ96DN2 955 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 OR14A2Q96R54 314 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 LRP12Q9Y561 859 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 TRAV6A0A075B6T7 132 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 NCBP2LA6PVI3 153 aaKnown RBP11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 SDCBPO00560 298 aaPredicted RBP11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 SBK3P0C264 359 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 DAOP14920 347 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 RPUSD3Q6P087 351 aaKnown RBP11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 OR1K1Q8NGR3 316 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 ARL11Q969Q4 196 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 PHOX2BQ99453 314 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 OR2S2Q9NQN1 319 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 ARID2Q68CP9 1835 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 CLDN1O95832 211 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 TPT1P13693 172 aaKnown RBP11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 DUSP1P28562 367 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 PCSK6P29122 969 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 C20orf27Q9GZN8 174 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 ACOXLQ9NUZ1 547 aa11.88□□□□□ -0.51
PRPF38A-201ENST00000257181 ETV5P41161 510 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 GNB1P62873 340 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 PXDC1Q5TGL8 231 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 MRPL14Q6P1L8 145 aaKnown RBP11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 SMAP2Q8WU79 429 aaPredicted RBP11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 FADS1O60427 444 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 TLE4Q04727 773 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 C12orf73Q69YU5 71 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 STEAP1BQ6NZ63 245 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms