RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 TCEAL7Q9BRU2 100 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 ICMTO60725 284 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 DEFA6Q01524 100 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 SNTB1Q13884 538 aaKnown RBP16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 ST8SIA2Q92186 375 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 MMP25Q9NPA2 562 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 TJP1Q07157 1748 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 UBE2L5PA0A1B0GUS4 154 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF727A8MUV8 499 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 PPP1R1CQ8WVI7 109 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 CCL17Q92583 94 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 ADGRL4Q9HBW9 690 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 MED19A0JLT2 244 aaPredicted RBP16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 SCO1O75880 301 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 SLC25A4P12235 298 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 FCER1GP30273 86 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 WDR38Q5JTN6 314 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 ACOT7LQ6ZUV0 252 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 EXTL1Q92935 676 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 TERTO14746 1132 aaKnown RBP16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 CBLN3Q6UW01 205 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 TSEN54Q7Z6J9 526 aaKnown RBP16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 NKX6-2Q9C056 277 aaPredicted RBP16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 GLI3P10071 1580 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 OR5H15A6NDH6 313 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 LIMK1P53667 647 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 C1orf210Q8IVY1 113 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 RD3LP0DJH9 198 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 FGF7P21781 194 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 GALNSP34059 522 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 WNT3P56703 355 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 PRICKLE4Q2TBC4 344 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 SMIM21Q3B7S5 101 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF787Q6DD87 383 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 RPUSD3Q6P087 351 aaKnown RBP16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 IER2Q9BTL4 223 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 A0A0B4J2E0 115 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 A0A1B0GX12 115 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 CHEK1O14757 476 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 DRD3P35462 400 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF628Q5EBL2 1059 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 ACER2Q5QJU3 275 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF547Q8IVP9 402 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 GPX8Q8TED1 209 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 TEX51A0A1B0GUA7 166 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 PYCARD-AS1I3L0S3 204 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 KCNK15Q9H427 330 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 CLEC18AA5D8T8 446 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 C3orf80F5H4A9 247 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 FUT6P51993 359 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 CLEC18CQ8NCF0 446 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 FGF20Q9NP95 211 aaPredicted RBP16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 SIGLEC7Q9Y286 467 aa16.74■□□□□ 0.27
SMARCC1-201ENST00000254480 M0R1X1 148 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 PPP1R2P9O14990 202 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 MBTPS2O43462 519 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 KDF1Q8NAX2 398 aaPredicted RBP16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 GPR32P1Q8NGA4 272 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 ATP6V1G2-DDX39BF2Z307 99 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 OPN1MWP04001 364 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 OPN1MW2P0DN77 364 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 OPN1MW3P0DN78 364 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 TMEM267Q0VDI3 215 aaPredicted RBP16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 ZPBPQ9BS86 351 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 SERTM1A2A2V5 107 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 JTBO76095 146 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 OCIAD1Q9NX40 245 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 SEC14L6B5MCN3 397 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 H7BYZ3 331 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF205O95201 554 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 FABP1P07148 127 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 OR5I1Q13606 314 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 DNAJB12Q9NXW2 375 aaKnown RBP16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 TRGV10A0A0A0MS01 117 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 PTBP1P26599 531 aaKnown RBP eCLIP16.73■□□□□ 0.275e-8■■■■■ 40.9
SMARCC1-201ENST00000254480 OXA1LQ15070 435 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 TOMM34Q15785 309 aaPredicted RBP16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 HES3Q5TGS1 186 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 TMEM88Q6PEY1 159 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 SPRED2Q7Z698 418 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 LYG2Q86SG7 212 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 KIAA1958Q8N8K9 716 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 APOBEC3DQ96AK3 386 aaPredicted RBP16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 OR8B4Q96RC9 309 aa16.73■□□□□ 0.27
SMARCC1-201ENST00000254480 PPP5D1E7EU14 171 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 PDGFBP01127 241 aaPredicted RBP16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 ZBTB25P24278 435 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 OR10D3Q8NH80 312 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 ARHGAP5-AS1Q96IT6 56 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 ADGRG3Q86Y34 549 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 DND1Q8IYX4 353 aaKnown RBP16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 DUS3LQ96G46 650 aaKnown RBP16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 OR2A5Q96R48 311 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 FAAP24Q9BTP7 215 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 GSX2Q9BZM3 304 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 ACTR3CQ9C0K3 210 aaPredicted RBP16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 OR2J3O76001 311 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF32P17041 273 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 BTLAQ7Z6A9 289 aa16.72■□□□□ 0.27
SMARCC1-201ENST00000254480 OR5AP2Q8NGF4 316 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms