RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 FLVCR1Q9Y5Y0 555 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 F8VVB4 439 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 F8VWA3 439 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 DHRS3O75911 302 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 WDPCPO95876 746 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 TPT1P13693 172 aaKnown RBP14.43□□□□□ -0.1
HOXD3-201ENST00000249440 ARL6IP1Q15041 203 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 OPN5Q6U736 354 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 UQCC3Q6UW78 93 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 LHFPL1Q86WI0 220 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 PP6455Q8WZ26 134 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 MARC2Q969Z3 335 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 LYZL4Q96KX0 146 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 RNF126Q9BV68 326 aa14.43□□□□□ -0.1
HOXD3-201ENST00000249440 RTTNQ86VV8 2226 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 LOC102723996A0A087X1L8 192 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 STMND1H3BQB6 276 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 KCNAB3O43448 404 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 NAT2P11245 290 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 BLVRBP30043 206 aaPredicted RBP14.42□□□□□ -0.1
HOXD3-201ENST00000249440 SNU13P55769 128 aaKnown RBP14.42□□□□□ -0.1
HOXD3-201ENST00000249440 SLC9A3R2Q15599 337 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 TMEM54Q969K7 222 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 RTBDNQ9BSG5 229 aaPredicted RBP14.42□□□□□ -0.1
HOXD3-201ENST00000249440 FAM117AQ9C073 453 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 PCDHB10Q9UN67 800 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 V9GYS6 101 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 SERPINE3A8MV23 424 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 NPIPA2E9PIF3 369 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 NPIPA3F8WFD2 350 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 APOC1P02654 83 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 CSNK2A1P68400 391 aaPredicted RBP14.42□□□□□ -0.1
HOXD3-201ENST00000249440 ZXDAP98168 799 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 DEFA5Q01523 94 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 MC2RQ01718 297 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 NAAAQ02083 359 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 DMRTC1Q5HYR2 192 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 C1QL2Q7Z5L3 287 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 CSNK2A3Q8NEV1 391 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 BPIFCQ8NFQ6 507 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 NPRL2Q8WTW4 380 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 NAT6Q93015 286 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 LRRC46Q96FV0 321 aa14.42□□□□□ -0.1
HOXD3-201ENST00000249440 LIN37Q96GY3 246 aaPredicted RBP14.42□□□□□ -0.1
HOXD3-201ENST00000249440 RAB19A4D1S5 217 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 FOXI3A8MTJ6 420 aaPredicted RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 NUPL2O15504 423 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 MTRF1O75570 445 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 FGF5P12034 268 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 ZNF133P52736 654 aaPredicted RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 SUPT4H1P63272 117 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 ENDOGQ14249 297 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 IL11RAQ14626 422 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 UBE2V2Q15819 145 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 PHYHD1Q5SRE7 291 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 AADACL3Q5VUY0 350 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 ATRAIDQ6UW56 229 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 FOXL2NBQ6ZUU3 175 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 BAP18Q8IXM2 172 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 LRRC18Q8N456 261 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 SLC30A7Q8NEW0 376 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 OR13G1Q8NGZ3 307 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 NARS2Q96I59 477 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 NAA11Q9BSU3 229 aaPredicted RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 CHST5Q9GZS9 411 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 IGHV1-45A0A0A0MS14 117 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 C5orf63A6NC05 138 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 ADAP1O75689 374 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 PI3P19957 117 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 SERPINA2P20848 420 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 DSCR4P56555 118 aaPredicted RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 RAET1LQ5VY80 246 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 RTL6Q6ICC9 239 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 CRIP3Q6Q6R5 217 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 SLC16A14Q7RTX9 510 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 OR1S2Q8NGQ3 325 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 HAS2Q92819 552 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 C10orf35Q96D05 121 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 ZC3H10Q96K80 434 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 GNRHR2Q96P88 292 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 ZNF385AQ96PM9 386 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 RBM24Q9BX46 236 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 ANGPTL4Q9BY76 406 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 METTL8Q9H825 291 aaKnown RBP14.41□□□□□ -0.1
HOXD3-201ENST00000249440 EHFQ9NZC4 300 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 OSGIN2Q9Y236 505 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 SIT1Q9Y3P8 196 aa14.41□□□□□ -0.1
HOXD3-201ENST00000249440 WDFY3Q8IZQ1 3526 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 CFAP54Q96N23 3096 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 OR5H15A6NDH6 313 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 SDCBPO00560 298 aaPredicted RBP14.4□□□□□ -0.1
HOXD3-201ENST00000249440 FGF16O43320 207 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 DHHO43323 396 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 KLK3P07288 261 aaPredicted RBP14.4□□□□□ -0.1
HOXD3-201ENST00000249440 CELA2AP08217 269 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 FCGR2AP12318 317 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 FAHP16930 419 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 CTRB1P17538 263 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 CPT2P23786 658 aa14.4□□□□□ -0.1
HOXD3-201ENST00000249440 AIMP2Q13155 320 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms