RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 DAZAP2Q15038 168 aaPredicted RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 CEACAM21Q3KPI0 293 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 MZT2AQ6P582 158 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 LHFPL2Q6ZUX7 228 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 DMRTC2Q8IXT2 367 aaPredicted RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 OR5A2Q8NGI9 324 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 OR6M1Q8NGM8 313 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 SYNPRQ8TBG9 265 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 ZC3HAV1LQ96H79 300 aaKnown RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 SORCS2Q96PQ0 1159 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 HIST1H2AAQ96QV6 131 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 TMEM204Q9BSN7 226 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 BARHL1Q9BZE3 327 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 GHRLQ9UBU3 117 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 PLEKHB1Q9UF11 243 aaPredicted RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 GPR160Q9UJ42 338 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 CMAHPQ9Y471 501 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 DOPEY1Q5JWR5 2465 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 DIDO1Q9BTC0 2240 aaKnown RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 MYO18BQ8IUG5 2567 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 CLEC18AA5D8T8 446 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 ATP6V1G2-DDX39BF2Z307 99 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 SLC17A2O00624 439 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 ST8SIA5O15466 376 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 LMX1BO60663 402 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 OCMP0CE72 109 aaPredicted RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 CALCBP10092 127 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 ALDH3B1P43353 468 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 RBP2P50120 134 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 KLF3P57682 345 aaPredicted RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 UBE2V2Q15819 145 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 FAM166AQ6J272 317 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 ALKBH2Q6NS38 261 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 ADAM5Q6NVV9 412 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 CLEC18BQ6UXF7 455 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 NR2C2APQ86WQ0 139 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 ZDHHC23Q8IYP9 409 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 OR5AS1Q8N127 324 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 PNLDC1Q8NA58 520 aaKnown RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 CLEC18CQ8NCF0 446 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 OR8G5Q8NG78 346 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 OR13C9Q8NGT0 318 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 MCFD2Q8NI22 146 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 MRPL24Q96A35 216 aaKnown RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 PLPPR2Q96GM1 343 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 SPOCK3Q9BQ16 436 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 SLC30A2Q9BRI3 323 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 PAPOLGQ9BWT3 736 aaKnown RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 POFUT1Q9H488 388 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 CA10Q9NS85 328 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 AK6Q9Y3D8 172 aaKnown RBP11.09□□□□□ -0.63
LSM8-201ENST00000249299 RHBDD3Q9Y3P4 386 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 RNF115Q9Y4L5 304 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 PEX16Q9Y5Y5 336 aa11.09□□□□□ -0.63
LSM8-201ENST00000249299 UBR5O95071 2799 aaPredicted RBP11.08□□□□□ -0.64
LSM8-201ENST00000249299 IGKV1-9A0A0C4DH69 117 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 MAS1P04201 325 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 CLEC2LP0C7M8 214 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 UBBP0CG47 229 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 AZGP1P25311 298 aaKnown RBP11.08□□□□□ -0.64
LSM8-201ENST00000249299 ZNF93P35789 620 aaPredicted RBP11.08□□□□□ -0.64
LSM8-201ENST00000249299 FAM189A2Q15884 450 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 FAM76BQ5HYJ3 339 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 DDI2Q5TDH0 399 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 OR2T2Q6IF00 324 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 OR51A2Q8NGJ7 313 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 OR13G1Q8NGZ3 307 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 PTX4Q96A99 478 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 GFI1Q99684 422 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 TMEM100Q9NV29 134 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 FBLN5Q9UBX5 448 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 STEAP1Q9UHE8 339 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 ETV7Q9Y603 341 aa11.08□□□□□ -0.64
LSM8-201ENST00000249299 RELNP78509 3460 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 ADGRG4Q8IZF6 3080 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.07□□□□□ -0.64
LSM8-201ENST00000249299 DEFB108AA8MXU0 73 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 SHISA9B4DS77 424 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 H3BSH0 61 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 HCKP08631 526 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 FABP6P51161 128 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 ATP1B3P54709 279 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 ERVS71-1P61550 626 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 GNG3P63215 75 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 SPOCK1Q08629 439 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 PRDX4Q13162 271 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 KISS1Q15726 138 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 EFNB3Q15768 340 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 RAB11BQ15907 218 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 SPATA46Q5T0L3 261 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 PLCXD3Q63HM9 321 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 CELF2-AS1Q8N7Q2 184 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 ZSCAN4Q8NAM6 433 aaPredicted RBP11.07□□□□□ -0.64
LSM8-201ENST00000249299 OR5P3Q8WZ94 311 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 PIGCQ92535 297 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 ORAI1Q96D31 301 aa11.07□□□□□ -0.64
LSM8-201ENST00000249299 ITPKCQ96DU7 683 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms