RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MED9Q9NWA0 146 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 PIGLQ9Y2B2 252 aa14.16□□□□□ -0.14
UBE3D-201ENST00000237186 NOP16Q9Y3C1 178 aaKnown RBP14.16□□□□□ -0.14
UBE3D-201ENST00000237186 COL27A1Q8IZC6 1860 aaPredicted RBP14.15□□□□□ -0.14
UBE3D-201ENST00000237186 WDFY4Q6ZS81 3184 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 OR5H14A6NHG9 310 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 LINC01387J3KSC0 135 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 SGCEO43556 437 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 CXCL13O43927 109 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 DBHP09172 617 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 CLDN15P56746 228 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 FOXO1Q12778 655 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 MICBQ29980 383 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 OR10D3Q8NH80 312 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 SCARB1Q8WTV0 552 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 LOXL4Q96JB6 756 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 MFFQ9GZY8 342 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 EML6Q6ZMW3 1958 aa14.15□□□□□ -0.14
UBE3D-201ENST00000237186 CCDC187A0A096LP49 1063 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 STMND1H3BQB6 276 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 DUS4LO95620 317 aaKnown RBP14.14□□□□□ -0.15
UBE3D-201ENST00000237186 PMP2P02689 132 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 FAHP16930 419 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 GFRA1P56159 465 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 TAS2R31P59538 309 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 IL13RA1P78552 427 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 SCRN3Q0VDG4 424 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 PPA1Q15181 289 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 SFRP5Q5T4F7 317 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 GSG1LQ6UXU4 331 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 AAED1Q7RTV5 226 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 COMMD7Q86VX2 200 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 OR1F12Q8NHA8 337 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 ST8SIA4Q92187 359 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 PHB2Q99623 299 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 CRLF2Q9HC73 371 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 GPR132Q9UNW8 380 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 CFAP54Q96N23 3096 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 OR6C6A6NF89 314 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 DBX1A6NMT0 343 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 PDGFAP04085 211 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 MGMTP16455 207 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 MPGP29372 298 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 SNAI3Q3KNW1 292 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 TOR2AQ5JU69 321 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 JMJD6Q6NYC1 403 aaPredicted RBP14.14□□□□□ -0.15
UBE3D-201ENST00000237186 SLC51BQ86UW2 128 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 SULF2Q8IWU5 870 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 TMEM185AQ8NFB2 350 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 OR51T1Q8NGJ9 327 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 SPSB1Q96BD6 273 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF775Q96BV0 537 aaPredicted RBP14.14□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF230Q9UIE0 474 aaPredicted RBP14.14□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF391Q9UJN7 358 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 SDK2Q58EX2 2172 aa14.14□□□□□ -0.15
UBE3D-201ENST00000237186 NCOA6Q14686 2063 aaPredicted RBP14.13□□□□□ -0.15
UBE3D-201ENST00000237186 A0A0D9SG52 128 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 LNP1A1A4G5 178 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 PMS2P1A4D2B8 440 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 SERPINE3A8MV23 424 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 C9orf172C9J069 976 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 CYTIPO60759 359 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 JMJD7P0C870 316 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 FCGR2AP12318 317 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 WIPI1Q5MNZ9 446 aaPredicted RBP14.13□□□□□ -0.15
UBE3D-201ENST00000237186 RTL6Q6ICC9 239 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 RFPL4BQ6ZWI9 263 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 PEG10Q86TG7 708 aaKnown RBP14.13□□□□□ -0.15
UBE3D-201ENST00000237186 LHFPL1Q86WI0 220 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 CCDC28AQ8IWP9 274 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 SEMA6DQ8NFY4 1073 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 ROBO4Q8WZ75 1007 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 CPNE4Q96A23 557 aaPredicted RBP14.13□□□□□ -0.15
UBE3D-201ENST00000237186 WBP1Q96G27 269 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 SCGB3A2Q96PL1 93 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 TIMM10BQ9Y5J6 103 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 R4GN57 208 aa14.13□□□□□ -0.15
UBE3D-201ENST00000237186 POU3F2P20265 443 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-201ENST00000237186 STARP49675 285 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 CAMK2BQ13554 666 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF345Q14585 488 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 AANATQ16613 207 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 NRN1LQ496H8 165 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 NSUN5P2Q63ZY6 315 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 C11orf87Q6NUJ2 197 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF546Q86UE3 836 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 ADAD2Q8NCV1 583 aaKnown RBP14.12□□□□□ -0.15
UBE3D-201ENST00000237186 TMEM45BQ96B21 275 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 GPR87Q9BY21 358 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 PECRQ9BY49 303 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 FAM117AQ9C073 453 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 LOC100509620A0A075B734 347 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 PINLYPA6NC86 204 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 TRAPPC6AO75865 159 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 OR2F2O95006 317 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 NMBP08949 121 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 LIPCP11150 499 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF32P17041 273 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 CPT2P23786 658 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 PCBD1P61457 104 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms