RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SERPINA4P29622 427 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 CRYBB1P53674 252 aaPredicted RBP11.55□□□□□ -0.56
MSH2-201ENST00000233146 ZFP36L1Q07352 338 aaKnown RBP11.55□□□□□ -0.56
MSH2-201ENST00000233146 PNRC1Q12796 327 aaPredicted RBP11.55□□□□□ -0.56
MSH2-201ENST00000233146 FBXW12Q6X9E4 464 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 CMTM1Q8IZ96 169 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 STPG4Q8N801 248 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 SUSD3Q96L08 255 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 RTBDNQ9BSG5 229 aaPredicted RBP11.55□□□□□ -0.56
MSH2-201ENST00000233146 TUBD1Q9UJT1 453 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 DOCK3Q8IZD9 2030 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 SMIM10L2AP0DMW4 78 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 SMIM10L2BP0DMW5 78 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 SPINT3P49223 89 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 TAF9Q16594 264 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
MSH2-201ENST00000233146 TTC9BQ8N6N2 239 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 GPR119Q8TDV5 335 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 THRSPQ92748 146 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 DCBLD2Q96PD2 775 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 KXD1Q9BQD3 176 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 WWTR1Q9GZV5 400 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 VWA8A3KMH1 1905 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 CCDC85CA6NKD9 419 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 YPEL1O60688 119 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 KLF8O95600 359 aaPredicted RBP11.54□□□□□ -0.56
MSH2-201ENST00000233146 PRDX4Q13162 271 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 IAH1Q2TAA2 248 aaPredicted RBP11.54□□□□□ -0.56
MSH2-201ENST00000233146 EIPR1Q53HC9 387 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 SLC16A9Q7RTY1 509 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 METTL27Q8N6F8 245 aaPredicted RBP11.54□□□□□ -0.56
MSH2-201ENST00000233146 NUP43Q8NFH3 380 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 OR2D3Q8NGH3 330 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 TSEN15Q8WW01 171 aaKnown RBP11.54□□□□□ -0.56
MSH2-201ENST00000233146 ZCCHC14Q8WYQ9 949 aaKnown RBP11.54□□□□□ -0.56
MSH2-201ENST00000233146 PTX4Q96A99 478 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 YPEL2Q96QA6 119 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 RCL1Q9Y2P8 373 aaKnown RBP11.54□□□□□ -0.56
MSH2-201ENST00000233146 M0QZ24 198 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 KLKB1P03952 638 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 LAMP2P13473 410 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 HOXB2P14652 356 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 CCKBRP32239 447 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 GNB2P62879 340 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 HIST1H3AP68431 136 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 TGIF2LYQ8IUE0 185 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 SGPP2Q8IWX5 399 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 DTWD2Q8NBA8 298 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 OR10G4Q8NGN3 311 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 SDSLQ96GA7 329 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 CTDSP1Q9GZU7 261 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 PPIAL4AQ9Y536 164 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 ARID1AO14497 2285 aa11.54□□□□□ -0.56
MSH2-201ENST00000233146 GLOD5A6NK44 160 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 CNOT4O95628 575 aaKnown RBP11.53□□□□□ -0.56
MSH2-201ENST00000233146 KNG1P01042 644 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 PI3P19957 117 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 CLDN6P56747 220 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 PLXDC2Q6UX71 529 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 GRHL3Q8TE85 626 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 FGGYQ96C11 551 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 ALG12Q9BV10 488 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 IKZF2Q9UKS7 526 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 OR51B4Q9Y5P0 310 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 SPTBP11277 2137 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 THSD7BQ9C0I4 1608 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 A6NJY4 79 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 PFN1P07737 140 aaKnown RBP11.53□□□□□ -0.56
MSH2-201ENST00000233146 OR5G3P0C626 314 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 CTSAP10619 480 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 TRA2BP62995 288 aaKnown RBP11.53□□□□□ -0.56
MSH2-201ENST00000233146 RUNX2Q13950 521 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 SAMD7Q7Z3H4 446 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 CNRIP1Q96F85 164 aaPredicted RBP11.53□□□□□ -0.56
MSH2-201ENST00000233146 PGAM5Q96HS1 289 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 CLUHP3Q96NS8 147 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 RNF2Q99496 336 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 CMKLR1Q99788 373 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 ADAM29Q9UKF5 820 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 NDUFB2O95178 105 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 DUSP8Q13202 625 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 GRINAQ7Z429 371 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 RTN4RL1Q86UN2 441 aaPredicted RBP11.53□□□□□ -0.56
MSH2-201ENST00000233146 WDFY1Q8IWB7 410 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 H1FOOQ8IZA3 346 aaPredicted RBP11.53□□□□□ -0.56
MSH2-201ENST00000233146 MOB3AQ96BX8 217 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 FLRT3Q9NZU0 649 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 CGGBP1Q9UFW8 167 aaPredicted RBP11.53□□□□□ -0.56
MSH2-201ENST00000233146 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
MSH2-201ENST00000233146 COL4A5P29400 1685 aa11.53□□□□□ -0.56
MSH2-201ENST00000233146 PAPPA2Q9BXP8 1791 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 FIGNL2A6NMB9 653 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 SCDO00767 359 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 FPR2P25090 351 aa11.52□□□□□ -0.56
MSH2-201ENST00000233146 RPL4P36578 427 aaKnown RBP11.52□□□□□ -0.56
MSH2-201ENST00000233146 RPL19P84098 196 aaKnown RBP11.52□□□□□ -0.56
MSH2-201ENST00000233146 MMDQ15546 238 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms