RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 GUSBP11Q6P575 273 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 RTBDNQ9BSG5 229 aaPredicted RBP14.32□□□□□ -0.12
LTBR-201ENST00000228918 CYTL1Q9NRR1 136 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 C19orf25Q9UFG5 118 aaPredicted RBP14.32□□□□□ -0.12
LTBR-201ENST00000228918 OSGIN2Q9Y236 505 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 CACNA1EQ15878 2313 aa14.32□□□□□ -0.12
LTBR-201ENST00000228918 F8W036 122 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 H7C2Y5 167 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 ADAP1O75689 374 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 LYL1P12980 280 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 PI3P19957 117 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 CTSSP25774 331 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 EIF1P41567 113 aaKnown RBP14.31□□□□□ -0.12
LTBR-201ENST00000228918 ARHGDIBP52566 201 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 CLDN17P56750 224 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 ECH1Q13011 328 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 AADACL3Q5VUY0 350 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 BAP18Q8IXM2 172 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 PNLDC1Q8NA58 520 aaKnown RBP14.31□□□□□ -0.12
LTBR-201ENST00000228918 PGAM5Q96HS1 289 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 LYZL4Q96KX0 146 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 SCGB3A2Q96PL1 93 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 DEFB126Q9BYW3 111 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 PRR13Q9NZ81 148 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 PRSS44E7EML9 344 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 LINC01387J3KSC0 135 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 PNLIPP16233 465 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 ALDH3B1P43353 468 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 DHPSP49366 369 aaPredicted RBP14.31□□□□□ -0.12
LTBR-201ENST00000228918 AKR1D1P51857 326 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 LSM6P62312 80 aaKnown RBP14.31□□□□□ -0.12
LTBR-201ENST00000228918 SLC35A1P78382 337 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 KISS1Q15726 138 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 ANKRD55Q3KP44 614 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 DMRTC1Q5HYR2 192 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 Q7L0L9 218 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 GTPBP8Q8N3Z3 284 aaPredicted RBP14.31□□□□□ -0.12
LTBR-201ENST00000228918 OR51T1Q8NGJ9 327 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 OR5D18Q8NGL1 313 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 LIN37Q96GY3 246 aaPredicted RBP14.31□□□□□ -0.12
LTBR-201ENST00000228918 TMEM100Q9NV29 134 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 GHRLQ9UBU3 117 aa14.31□□□□□ -0.12
LTBR-201ENST00000228918 CHCHD2Q9Y6H1 151 aaPredicted RBP14.31□□□□□ -0.12
LTBR-201ENST00000228918 IGHV5-10-1A0A0J9YXX1 117 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 TLX3O43711 291 aaPredicted RBP14.3□□□□□ -0.12
LTBR-201ENST00000228918 ATG12O94817 140 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 HFEQ30201 348 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 PRAMEF20Q5VT98 475 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 PRSS54Q6PEW0 395 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 C1QL2Q7Z5L3 287 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 SPEM1Q8N4L4 309 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 BHLHE23Q8NDY6 225 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 ESRP2Q9H6T0 727 aaKnown RBP14.3□□□□□ -0.12
LTBR-201ENST00000228918 TMEM218A2RU14 115 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 MSGN1A6NI15 193 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 HPNP05981 417 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 MSR1P21757 451 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 FKBP2P26885 142 aaKnown RBP14.3□□□□□ -0.12
LTBR-201ENST00000228918 THBS4P35443 961 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 PTGFRP43088 359 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 SNU13P55769 128 aaKnown RBP14.3□□□□□ -0.12
LTBR-201ENST00000228918 TAS2R46P59540 309 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 CCL7P80098 99 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 RHBDD1Q8TEB9 315 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 NPRL2Q8WTW4 380 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 ST6GALNAC5Q9BVH7 336 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 SLC26A1Q9H2B4 701 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 OR5AC2Q9NZP5 309 aa14.3□□□□□ -0.12
LTBR-201ENST00000228918 MYO7BQ6PIF6 2116 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 LY6G6EA0A0G2JKS1 128 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 PQLC2LA1A4F0 135 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 HTR3BO95264 441 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 CD79AP11912 226 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 NR2C1P13056 603 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 RPS2P15880 293 aaKnown RBP14.29□□□□□ -0.12
LTBR-201ENST00000228918 OR3A2P47893 321 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 CSNK1A1P48729 337 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 STARD6P59095 220 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 CSNK2A1P68400 391 aaPredicted RBP14.29□□□□□ -0.12
LTBR-201ENST00000228918 C10orf128Q5T292 105 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 CSNK2A3Q8NEV1 391 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 PAQR8Q8TEZ7 354 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 NELFAQ9H3P2 528 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 ZNF160Q9HCG1 818 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 EHFQ9NZC4 300 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 U3KQA8 63 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 V9GYS6 101 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 A0A0U1RQV5 110 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 STMND1H3BQB6 276 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 SDCBPO00560 298 aaPredicted RBP14.29□□□□□ -0.12
LTBR-201ENST00000228918 DHRS3O75911 302 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 H3F3AP84243 136 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 AIMP2Q13155 320 aaKnown RBP14.29□□□□□ -0.12
LTBR-201ENST00000228918 ENDOGQ14249 297 aaKnown RBP14.29□□□□□ -0.12
LTBR-201ENST00000228918 CCDC157Q569K6 752 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 PHYHD1Q5SRE7 291 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 DTX1Q86Y01 620 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 RNF141Q8WVD5 230 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 OR10C1Q96KK4 312 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 CCDC74BQ96LY2 380 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms