RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 TRBV5-7A0A0A0MS05 114 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 C5orf52A6NGY3 159 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 HLA-HP01893 362 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 RPS18P62269 152 aaKnown RBP12.95□□□□□ -0.34
PRDM4-201ENST00000228437 ADIRFQ15847 76 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 ZNF695Q8IW36 515 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 SLC43A2Q8N370 569 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 SLC37A2Q8TED4 501 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 ANKRD9Q96BM1 317 aaPredicted RBP12.95□□□□□ -0.34
PRDM4-201ENST00000228437 MENTQ9BUN1 341 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 PBOV1Q9GZY1 135 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 RAB18Q9NP72 206 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 SNRNP200O75643 2136 aaKnown RBP12.95□□□□□ -0.34
PRDM4-201ENST00000228437 PRF1P14222 555 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 HOXB1P14653 301 aaPredicted RBP12.95□□□□□ -0.34
PRDM4-201ENST00000228437 TAS2R46P59540 309 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 SLC35A1P78382 337 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 LHX8Q68G74 356 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 VOPP1Q96AW1 172 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 ZNF160Q9HCG1 818 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 TCAPO15273 167 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 F10P00742 488 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 RRADP55042 308 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 NHLH2Q02577 135 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 C6orf201Q7Z4U5 140 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 ZNF429Q86V71 674 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 MR1Q95460 341 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 MCHR2Q969V1 340 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 ATG101Q9BSB4 218 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 NMES1Q9C002 83 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 SH3BGRL3Q9H299 93 aa12.95□□□□□ -0.34
PRDM4-201ENST00000228437 FAM24AA6NFZ4 105 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 ZNF728P0DKX0 622 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 SLC22A25Q6T423 547 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 C5orf66Q9H5L9 145 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 SLC17A5Q9NRA2 495 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 A0A1B0GTI1 187 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 H0YL77 283 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 CHRM2P08172 466 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 FOXL2P58012 376 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 UTP23Q9BRU9 249 aaKnown RBP12.94□□□□□ -0.34
PRDM4-201ENST00000228437 HDHD3Q9BSH5 251 aaPredicted RBP12.94□□□□□ -0.34
PRDM4-201ENST00000228437 RBM24Q9BX46 236 aaKnown RBP12.94□□□□□ -0.34
PRDM4-201ENST00000228437 NMNAT2Q9BZQ4 307 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 VN1R1Q9GZP7 353 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 A0A1W2PR80 420 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 CYR61O00622 381 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 ZNF260Q3ZCT1 412 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 SPRED2Q7Z698 418 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 SCGB1C1Q8TD33 95 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 ADAMTS17Q8TE56 1095 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 ERGIC1Q969X5 290 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 LIN37Q96GY3 246 aaPredicted RBP12.94□□□□□ -0.34
PRDM4-201ENST00000228437 SLC5A6Q9Y289 635 aa12.94□□□□□ -0.34
PRDM4-201ENST00000228437 ST8SIA3O43173 380 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 MOSPD3O75425 235 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 OR8U8P0C7N1 319 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 OR5B2Q96R09 309 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 SDHAF3Q9NRP4 125 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 IGKV1D-42A0A075B6H8 117 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 CNOT4O95628 575 aaKnown RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 CT45A8P0DMV1 189 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 CT45A9P0DMV2 189 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 HIST1H1DP16402 221 aaKnown RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 NDUFB7P17568 137 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 RSPO4Q2I0M5 234 aaPredicted RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 CT45A2Q5DJT8 189 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 LILRA6Q6PI73 481 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 LURAP1LQ8IV03 231 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 SLC26A10Q8NG04 563 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 SLC2A8Q9NY64 477 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 METTL1Q9UBP6 276 aaKnown RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 SSSCA1O60232 199 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 IFNA5P01569 189 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 ZNF735P0CB33 412 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 OR5H8P0DN80 308 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 INSM1Q01101 510 aaPredicted RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 ZNF117Q03924 483 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 RTN4IP1Q8WWV3 396 aaPredicted RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 TMEM37Q8WXS4 190 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 OR5B12Q96R08 314 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 TUBG2Q9NRH3 451 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 TGIF2-C20orf24A0A0A6YYL0 155 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 SULT1A2P50226 295 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 SSTP61278 116 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 HSD11B2P80365 405 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 BAHD1Q8TBE0 780 aaPredicted RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
PRDM4-201ENST00000228437 VSTM2LQ96N03 204 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 KLHDC3Q9BQ90 382 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 CABLES2Q9BTV7 478 aa12.93□□□□□ -0.34
PRDM4-201ENST00000228437 TCF20Q9UGU0 1960 aaKnown RBP12.92□□□□□ -0.34
PRDM4-201ENST00000228437 ABHD16AO95870 558 aa12.92□□□□□ -0.34
PRDM4-201ENST00000228437 CD79AP11912 226 aa12.92□□□□□ -0.34
PRDM4-201ENST00000228437 MMP9P14780 707 aa12.92□□□□□ -0.34
PRDM4-201ENST00000228437 MTCP1P56278 107 aa12.92□□□□□ -0.34
PRDM4-201ENST00000228437 NKAIN1Q4KMZ8 207 aa12.92□□□□□ -0.34
PRDM4-201ENST00000228437 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms