RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SLC34A1Q06495 639 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 MZT1Q08AG7 82 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 RIPPLY1Q0D2K3 151 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 ZNF154Q13106 437 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 CR1LQ2VPA4 569 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 CDONQ4KMG0 1287 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 TMEM155Q4W5P6 130 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 WDR38Q5JTN6 314 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 CEP78Q5JTW2 689 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 FAM120AOSQ5T036 256 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 TTC23Q5W5X9 447 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
LSM5-201ENST00000223084 MOB3CQ70IA8 216 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 FAM220AQ7Z4H9 259 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 THAP5Q7Z6K1 395 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 GLCCI1Q86VQ1 547 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 RDH10Q8IZV5 341 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 C1orf87Q8N0U7 546 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 PRSS35Q8N3Z0 413 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 FTMTQ8N4E7 242 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 KLHL36Q8N4N3 616 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 SPICQ8N5J4 248 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 OR52I1Q8NGK6 324 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 OR51F2Q8NH61 342 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 NRG4Q8WWG1 115 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 HPSE2Q8WWQ2 592 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 OR5P3Q8WZ94 311 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 TMEM186Q96B77 213 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 RNF170Q96K19 258 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 MICU1Q9BPX6 476 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 TMEM246Q9BRR3 403 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 ADI1Q9BV57 179 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 PATZ1Q9HBE1 687 aaKnown RBP10.63□□□□□ -0.71
LSM5-201ENST00000223084 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 RNF7Q9UBF6 113 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 RPL36Q9Y3U8 105 aaKnown RBP10.63□□□□□ -0.71
LSM5-201ENST00000223084 PPIAL4AQ9Y536 164 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 PCDHGB1Q9Y5G3 927 aa10.63□□□□□ -0.71
LSM5-201ENST00000223084 CEACAM18A8MTB9 384 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 J3QLW9 94 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 GNAO1P09471 354 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 ATP6V1B1P15313 513 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 ZNF19P17023 458 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 EGR1P18146 543 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 ZFP36P26651 326 aaKnown RBP10.62□□□□□ -0.71
LSM5-201ENST00000223084 CAPGP40121 348 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 SNCBQ16143 134 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 CHRFAM7AQ494W8 412 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 ZNF404Q494X3 552 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 KCTD8Q6ZWB6 473 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 ZDHHC23Q8IYP9 409 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 MUC20Q8N307 709 aaPredicted RBP10.62□□□□□ -0.71
LSM5-201ENST00000223084 PLPP7Q8NBV4 271 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 OR14K1Q8NGZ2 314 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 RPL3LQ92901 407 aaKnown RBP10.62□□□□□ -0.71
LSM5-201ENST00000223084 C4orf36Q96KX1 117 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 ZNF649Q9BS31 505 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 ALG8Q9BVK2 526 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 RTL8AQ9BWD3 113 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 BEX2Q9BXY8 128 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 SHARPINQ9H0F6 387 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 RNPEPL1Q9HAU8 725 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 MRPS18AQ9NVS2 196 aaKnown RBP10.62□□□□□ -0.71
LSM5-201ENST00000223084 TMEM160Q9NX00 188 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 V9GYS6 101 aa10.62□□□□□ -0.71
LSM5-201ENST00000223084 IGHV3OR15-7A0A075B7D8 119 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 F5H0A9 414 aaPredicted RBP10.61□□□□□ -0.71
LSM5-201ENST00000223084 LGALS8O00214 317 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 CDIPTO14735 213 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 MTRF1O75570 445 aaKnown RBP10.61□□□□□ -0.71
LSM5-201ENST00000223084 FADS2O95864 444 aaKnown RBP10.61□□□□□ -0.71
LSM5-201ENST00000223084 IGHA1P01876 353 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 WNT2P09544 360 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 CCL1P22362 96 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 GPM6AP51674 278 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
LSM5-201ENST00000223084 GMFBP60983 142 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 RAB40BQ12829 278 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 GALEQ14376 348 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 PLCXD3Q63HM9 321 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 LYPD2Q6UXB3 125 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 WDR82Q6UXN9 313 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 DOK3Q7L591 496 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 KRT74Q7RTS7 529 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 PRIMA1Q86XR5 153 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 GCSAMQ8N6F7 178 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 SETD9Q8NE22 299 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 OR2G2Q8NGZ5 317 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 LRRC29Q8WV35 223 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 SEH1LQ96EE3 360 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 PELI1Q96FA3 418 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 HIST1H2AAQ96QV6 131 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 ISG20L2Q9H9L3 353 aaKnown RBP10.61□□□□□ -0.71
LSM5-201ENST00000223084 ABCB9Q9NP78 766 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 GPR173Q9NS66 373 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 ERVK13-1Q9NX77 482 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 ENPP5Q9UJA9 477 aa10.61□□□□□ -0.71
LSM5-201ENST00000223084 TRAV20A0A0B4J274 112 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 A0A1B0GVI7 797 aa10.6□□□□□ -0.71
LSM5-201ENST00000223084 LOC107986453A0A1B0GWG9 222 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms