RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CD226Q15762 336 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 STUMQ69YW2 141 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 HPSE2Q8WWQ2 592 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 PIGMQ9H3S5 423 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 HES4Q9HCC6 221 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 KIR2DS1A0A191URI9 304 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 CYR61O00622 381 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 TGM1P22735 817 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 KIR2DS4P43632 304 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 ASCL1P50553 236 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 CYCSP99999 105 aaKnown RBP12.23□□□□□ -0.45
SIX4-201ENST00000216513 KIR2DS1Q14954 304 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 ADGRE4PQ86SQ3 457 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 GMDSO60547 372 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 OR8U8P0C7N1 319 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 ELK1P19419 428 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 PPT1P50897 306 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 LPCAT3Q6P1A2 487 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 ZNF721Q8TF20 911 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 VWCEQ96DN2 955 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 CXXC4Q9H2H0 198 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 RAB22AQ9UL26 194 aa12.23□□□□□ -0.45
SIX4-201ENST00000216513 C9orf172C9J069 976 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 FPR2P25090 351 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 FBXW9Q5XUX1 488 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 C20orf196Q8IYI0 205 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 ZFP57Q9NU63 452 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 GPR137BO60478 399 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 SCG5P05408 212 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 ZNF574Q6ZN55 896 aaPredicted RBP12.22□□□□□ -0.45
SIX4-201ENST00000216513 HSD17B11Q8NBQ5 300 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 ST3GAL6Q9Y274 331 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 TRBV23-1A0A0A0MS06 115 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 CLN5O75503 358 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 IL1AP01583 271 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 PDZD11Q5EBL8 140 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 TMPRSS11FQ6ZWK6 438 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 OR52B4Q8NGK2 314 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 MED19A0JLT2 244 aaPredicted RBP12.22□□□□□ -0.45
SIX4-201ENST00000216513 COX6A1P12074 109 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 WNT3P56703 355 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 CLDN20P56880 219 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 DGCR2P98153 550 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 LRRC28Q86X40 367 aaPredicted RBP12.22□□□□□ -0.45
SIX4-201ENST00000216513 TMEM52Q8NDY8 209 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 NMNAT2Q9BZQ4 307 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 PLEKHF2Q9H8W4 249 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 FLRT3Q9NZU0 649 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 C1orf196B1AJZ1 125 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 FUT6P51993 359 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 CCL8P80075 99 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 PRDX4Q13162 271 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 NUFIP2Q7Z417 695 aaKnown RBP12.22□□□□□ -0.45
SIX4-201ENST00000216513 CDC20BQ86Y33 519 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 SUMF2Q8NBJ7 301 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 OR51A4Q8NGJ6 313 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 GINS3Q9BRX5 216 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
SIX4-201ENST00000216513 DDOSTP39656 456 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 GABRA4P48169 554 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 PRRX1P54821 245 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 OR6M1Q8NGM8 313 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 TMEM230Q96A57 120 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 RAB33BQ9H082 229 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 BIN3Q9NQY0 253 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 ATPIF1Q9UII2 106 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 MGST1P10620 155 aaKnown RBP12.21□□□□□ -0.45
SIX4-201ENST00000216513 PRPH2P23942 346 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 RFESDQ8TAC1 157 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 C20orf85Q9H1P6 137 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 CLN8Q9UBY8 286 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 LOC100289279A0A1B0GTE1 492 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 FUCA1P04066 466 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 SERPINF1P36955 418 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 GP2P55259 537 aaKnown RBP12.21□□□□□ -0.45
SIX4-201ENST00000216513 TBCEQ15813 527 aaPredicted RBP12.21□□□□□ -0.45
SIX4-201ENST00000216513 C17orf107Q6ZR85 190 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 FAM214BQ7L5A3 538 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 ASCL5Q7RTU5 278 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 FAM219AQ8IW50 185 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 SLC7A6Q92536 515 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 CHST6Q9GZX3 395 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 KCNK15Q9H427 330 aa12.21□□□□□ -0.45
SIX4-201ENST00000216513 A0A0B4J2E0 115 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 A0A1B0GX12 115 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 ADH4P08319 380 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 SLC17A1Q14916 467 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 ZG16BQ96DA0 208 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 PLA2G12AQ9BZM1 189 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 AUNIPQ9H7T9 357 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 OR13C7P0DN81 318 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 GUCA2AQ02747 115 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 FOXO1Q12778 655 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 NECAP1Q8NC96 275 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 WDR34Q96EX3 536 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 RABL2AQ9UBK7 228 aaPredicted RBP12.21□□□□□ -0.46
SIX4-201ENST00000216513 RABL2BQ9UNT1 228 aa12.21□□□□□ -0.46
SIX4-201ENST00000216513 SCN3AQ9NY46 2000 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms