RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OR2AE1Q8NHA4 323 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 SLC5A6Q9Y289 635 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 UBE2L5PA0A1B0GUS4 154 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 H3BQ15 152 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 K7EQM0 130 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 DUS4LO95620 317 aaKnown RBP9.42□□□□□ -0.9
VCL-201ENST00000211998 HOXD4P09016 255 aaPredicted RBP9.42□□□□□ -0.9
VCL-201ENST00000211998 EDN3P14138 238 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 FKBP2P26885 142 aaKnown RBP9.42□□□□□ -0.9
VCL-201ENST00000211998 TAS2R60P59551 318 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 MED25Q71SY5 747 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 LILRA3Q8N6C8 439 aaPredicted RBP9.42□□□□□ -0.9
VCL-201ENST00000211998 OR52N4Q8NGI2 321 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 PINX1Q96BK5 328 aaKnown RBP9.42□□□□□ -0.9
VCL-201ENST00000211998 PPP1R14DQ9NXH3 145 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 SH3BGRL2Q9UJC5 107 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 LNP1A1A4G5 178 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 LINC00587B1AMM8 73 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 KLRC4-KLRK1H3BQV0 150 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 ABCD4O14678 606 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 ZNF737O75373 536 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 NHLH1Q02575 133 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 ACVR1Q04771 509 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 DGAT2L6Q6ZPD8 337 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 MSRB3Q8IXL7 192 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 SDF2Q99470 211 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 CA10Q9NS85 328 aa9.42□□□□□ -0.9
VCL-201ENST00000211998 B4DEV8 164 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 OR7C2O60412 319 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 FCMRO60667 390 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 OR2J2O76002 312 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 KLKB1P03952 638 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CTXN2P0C2S0 81 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CD99P14209 185 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 DHODHQ02127 395 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CLN3Q13286 438 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 AGERQ15109 404 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 BSXQ3C1V8 233 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CST9Q5W186 159 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 LEMD1Q68G75 181 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 RGS7BPQ6MZT1 257 aaPredicted RBP9.41□□□□□ -0.9
VCL-201ENST00000211998 ABHD17CQ6PCB6 329 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 ZNF573Q86YE8 665 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 SIGLEC11Q96RL6 698 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 STACQ99469 402 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 TWSG1Q9GZX9 223 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 SLCO1C1Q9NYB5 712 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 A0A1B0GX78 115 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 OLFM2O95897 454 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CFDP00746 253 aaPredicted RBP9.41□□□□□ -0.9
VCL-201ENST00000211998 TCN2P20062 427 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 GLRA1P23415 457 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 TAS2R45P59539 299 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CSNK1G2P78368 415 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 Q1RN00 199 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 LDLRAD3Q86YD5 345 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 ZNF775Q96BV0 537 aaPredicted RBP9.41□□□□□ -0.9
VCL-201ENST00000211998 ING1Q9UK53 422 aaPredicted RBP9.41□□□□□ -0.9
VCL-201ENST00000211998 ZNF346Q9UL40 294 aaKnown RBP9.41□□□□□ -0.9
VCL-201ENST00000211998 NWD2Q9ULI1 1742 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 LANCL1O43813 399 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CTAG2O75638 210 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 WNT11O96014 354 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 TMEM11P17152 192 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 ELOBQ15370 118 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 FA2HQ7L5A8 372 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 OR5C1Q8NGR4 320 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 TP53RKQ96S44 253 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CHRDL1Q9BU40 450 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 DDA1Q9BW61 102 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 BCL2L10Q9HD36 194 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 NAT8Q9UHE5 227 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 A4GNTQ9UNA3 340 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 WASHC3Q9Y3C0 194 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 NUMA1Q14980 2115 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 C7orf66A4D0T2 115 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 MAP1LC3B2A6NCE7 125 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 CTDSPLO15194 276 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 EIF4E2O60573 245 aaKnown RBP9.41□□□□□ -0.9
VCL-201ENST00000211998 MT-ATP6P00846 226 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 GYPAP02724 150 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 PPOXP50336 477 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 GPM6AP51674 278 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 KCNAB1Q14722 419 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 OTPQ5XKR4 325 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 SLC25A43Q8WUT9 341 aaPredicted RBP9.41□□□□□ -0.9
VCL-201ENST00000211998 SLAMF6Q96DU3 332 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 MAP1LC3BQ9GZQ8 125 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 DCAF16Q9NXF7 216 aa9.41□□□□□ -0.9
VCL-201ENST00000211998 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.41□□□□□ -0.9
VCL-201ENST00000211998 TMEM272A0A1B0GTI8 110 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 HSPB2A8KAH6 182 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 TIMM8AO60220 97 aaPredicted RBP9.4□□□□□ -0.9
VCL-201ENST00000211998 CD82P27701 267 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 SLC6A12P48065 614 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 HSPB2Q16082 182 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms