RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SLC25A42Q86VD7 318 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 LYPD6Q86Y78 171 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 FADS6Q8N9I5 356 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 NAXEQ8NCW5 288 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 OR10R2Q8NGX6 335 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 C2CD4CQ8TF44 421 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 IMMP1LQ96LU5 166 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 PRRT1Q99946 306 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 FN3KRPQ9HA64 309 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 SCPEP1Q9HB40 452 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 PROK2Q9HC23 129 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 CHMP1AQ9HD42 196 aaPredicted RBP11.56□□□□□ -0.56
CTNS-201ENST00000046640 FAM96BQ9Y3D0 163 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 IGLV3-32A0A0A0MS00 114 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 ZNF705EA8MWA4 302 aaPredicted RBP11.56□□□□□ -0.56
CTNS-201ENST00000046640 SULT1C2O00338 296 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 AGPAT2O15120 278 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 ATG12O94817 140 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 HTR3BO95264 441 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 FARS2O95363 451 aaKnown RBP11.56□□□□□ -0.56
CTNS-201ENST00000046640 ADCYAP1P18509 176 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 CFPP27918 469 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 GUCA1AP43080 201 aaPredicted RBP11.56□□□□□ -0.56
CTNS-201ENST00000046640 SSR4P51571 173 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 UBALD2Q8IYN6 164 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 NKAIN3Q8N8D7 197 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 ZC3H10Q96K80 434 aaKnown RBP11.56□□□□□ -0.56
CTNS-201ENST00000046640 GSKIPQ9P0R6 139 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 RAB22AQ9UL26 194 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 NPIPB13A6NJU9 1138 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 NPIPB4C9JG80 1138 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 NPIPA2E9PIF3 369 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 NPIPA3F8WFD2 350 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 H7C2Y5 167 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 SOCS1O15524 211 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 ZNHIT1O43257 154 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 ZIC3O60481 467 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 ACTL6AO96019 429 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 PATE4P0C8F1 98 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 ZNF17P17021 662 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 CSNK1A1P48729 337 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 SLC35A1P78382 337 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 OPN5Q6U736 354 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 PLXDC2Q6UX71 529 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 GALNTL5Q7Z4T8 443 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 RRNAD1Q96FB5 475 aaKnown RBP11.55□□□□□ -0.56
CTNS-201ENST00000046640 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 DNTTIP1Q9H147 329 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 HRH4Q9H3N8 390 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 PNRC2Q9NPJ4 139 aaKnown RBP11.55□□□□□ -0.56
CTNS-201ENST00000046640 MRPS28Q9Y2Q9 187 aaKnown RBP11.55□□□□□ -0.56
CTNS-201ENST00000046640 LOC390937A0A1W2PQ73 354 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 SDCBPO00560 298 aaPredicted RBP11.55□□□□□ -0.56
CTNS-201ENST00000046640 CD74P04233 296 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 EIF1P41567 113 aaKnown RBP11.55□□□□□ -0.56
CTNS-201ENST00000046640 FLI1Q01543 452 aaPredicted RBP11.55□□□□□ -0.56
CTNS-201ENST00000046640 MAML2Q8IZL2 1156 aaPredicted RBP11.55□□□□□ -0.56
CTNS-201ENST00000046640 OR4K15Q8NH41 348 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 PGAM5Q96HS1 289 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 ELL3Q9HB65 397 aaPredicted RBP11.55□□□□□ -0.56
CTNS-201ENST00000046640 HDGFL3Q9Y3E1 203 aa11.55□□□□□ -0.56
CTNS-201ENST00000046640 A0A0J9YW62 118 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 TMEM218A2RU14 115 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 TTLL8A6PVC2 850 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 EFSO43281 561 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 CRTAPO75718 401 aaPredicted RBP11.54□□□□□ -0.56
CTNS-201ENST00000046640 SSBP1Q04837 148 aaKnown RBP11.54□□□□□ -0.56
CTNS-201ENST00000046640 AIMP2Q13155 320 aaKnown RBP11.54□□□□□ -0.56
CTNS-201ENST00000046640 NKAPLQ5M9Q1 402 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 C1QL2Q7Z5L3 287 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 OR5AS1Q8N127 324 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 OR5AP2Q8NGF4 316 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 AQP3Q92482 292 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 EDEM2Q9BV94 578 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 TLNRD1Q9H1K6 362 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 WDR54Q9H977 334 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
CTNS-201ENST00000046640 A0A0A6YYD4 124 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 MSGN1A6NI15 193 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 TRAPPC6AO75865 159 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 LIFP15018 202 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 NFYBP25208 207 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 PSMB6P28072 239 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 RFC3P40938 356 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 MEF2DQ14814 521 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 DEFB123Q8N688 67 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 OR2Y1Q8NGV0 311 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 MITD1Q8WV92 249 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 NECAB3Q96P71 396 aaPredicted RBP11.54□□□□□ -0.56
CTNS-201ENST00000046640 ST6GALNAC5Q9BVH7 336 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 SRXN1Q9BYN0 137 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 IFT22Q9H7X7 185 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 FANCFQ9NPI8 374 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 ASPMQ8IZT6 3477 aa11.54□□□□□ -0.56
CTNS-201ENST00000046640 LOC102723996A0A087X1L8 192 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 TLX3O43711 291 aaPredicted RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 RFPL3SP0C7P2 107 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 SLC25A4P12235 298 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 FAHP16930 419 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms