RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Dda1Q9D9Z5 102 aa11.85□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Dazap2Q9DCP9 168 aa11.85□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 FcrlsQ9EQY5 509 aa11.85□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Fbxo6Q9QZN4 295 aa11.85□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Col5a1O88207 1838 aa11.85□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 AspmQ8CJ27 3122 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Gm28897A0A087WP44 222 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 MiipA2A7Y5 387 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Olfr1018A2ASV3 311 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 LipiF6YQT7 476 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Trav13d-3J3QMG8 112 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Speer4eK7N6S8 255 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Olfr329-psM9MMK4 331 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Stmn3O70166 180 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Foxl2O88470 375 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Timp1P12032 205 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Il5raP21183 415 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Rag2P21784 527 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 GipP48756 144 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 P58686 83 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Rac1P63001 192 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Shc1P98083 579 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Prss48Q14B25 312 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Gm6899Q3USS0 134 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Clpsl2Q3UW21 102 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Grb2Q60631 217 aaKnown RBP11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Olfr5Q60889 312 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 SprQ64105 261 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 SrmQ64674 302 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Q80Y39 304 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Stfa2l1Q8BWM3 103 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Zfp286Q8C0E6 519 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Neil1Q8K4Q6 389 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Dnmt3lQ9CWR8 421 aaKnown RBP11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Ogfod3Q9D136 315 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Ctag2Q9D9S4 219 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Lyzl6Q9DA11 148 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 AspdhQ9DCQ2 287 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 TectaO08523 2155 aa11.84□□□□□ -0.51
Pdlim5-208ENSMUST00000196220 Prss47A0A0N4SVQ0 395 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 A0A286YDM2 672 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Slc25a25A2ASZ8 469 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Vmn1r14H3BJ46 303 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Bet1O35623 118 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Stc2O88452 296 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Igk-V19-17P01633 149 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Igh-VJ558P01758 117 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Hoxb1P17919 297 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Apoc3P33622 99 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Rab22aP35285 194 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 NodalP43021 354 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Ikzf2P81183 526 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Xlr4cQ3TKR2 215 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 XylbQ3TNA1 551 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Gramd2aQ3V3G7 320 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 St6gal2Q76K27 524 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Il17fQ7TNI7 161 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Vgll4Q80V24 287 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Fam53bQ8BGR5 422 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Tbl1xr1Q8BHJ5 514 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Commd2Q8BXC6 199 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Plekhn1Q8C886 359 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Upp2Q8CGR7 320 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Duoxa1Q8VE49 341 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Asf1bQ9DAP7 202 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Xlr4bQ9JJQ7 215 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Jbts17Q8CE72 3214 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Sirpb1bA0A0A6YXN8 397 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Gm5678A0A1B0GRG8 277 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Gm45736A0A1B0GS18 427 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Olfr1214A2ATG3 311 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Wisp3D3Z5L9 354 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Olfr1425K7N659 312 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Sirpb1cK7N6K7 397 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Capn1O35350 713 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 H2-Ab1P01921 265 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 P06344 263 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Cbr2P08074 244 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 MdkP12025 140 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Tpi1P17751 299 aaKnown RBP11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Ear2P97425 156 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 CiartQ3TQ03 375 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Fam71f1Q3UZD7 341 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Amz2Q400C8 359 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Gpbar1Q80SS6 329 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Zfp747Q8BHM7 422 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 PcgF3Q8BTQ0 241 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Fbxo4Q8CHQ0 385 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Olfr1426Q8VG74 311 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Uxs1Q91XL3 420 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 MrgprdQ91ZB8 321 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 TardbpQ921F2 414 aaKnown RBP11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Sf3b5Q923D4 86 aaKnown RBP11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 9330161L09RikQ9D253 136 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Sec61a2Q9JLR1 476 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Neu3Q9JMH7 418 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Rad1Q9QWZ1 280 aa11.83□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 PtprbB2RU80 1998 aa11.82□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Olfr1255A2AUA4 310 aa11.82□□□□□ -0.52
Pdlim5-208ENSMUST00000196220 Rnaset2aC0HKG5 259 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms