RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tacstd2Q8BGV3 317 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gpr1Q8K087 353 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Il34Q8R1R4 235 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mfsd4b1Q8VCV9 425 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1389Q8VGX0 311 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tram1Q91V04 374 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ear6Q923L7 155 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Rgs19Q9CX84 216 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Trappc6bQ9D289 158 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Slc34a2Q9DBP0 697 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tmem25Q9DCF1 365 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 GmfgQ9ERL7 142 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Irak1bp1Q9ESJ7 259 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 TsnaxQ9QZE7 290 aaKnown RBP12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Znf346Q9R0B7 294 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Syt9Q9R0N9 491 aa12.04□□□□□ -0.48
Nup88-201ENSMUST00000035283 Arhgap21Q6DFV3 1944 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm4177D3YTX5 305 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Psg20E9Q9B4 475 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm8660K7N6J2 305 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vmn1r127K7N6J5 305 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vmn1r142K7N6U0 305 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ear3O35290 156 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Sod2P09671 222 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Cd40lgP27548 260 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 B4galnt1Q09200 533 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vezf1Q5SXC4 518 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tnfrsf8Q60846 498 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Parp16Q7TMM8 322 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Zfp790Q80ZX2 779 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 CmblQ8R1G2 245 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr394Q8VGR5 310 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Pno1Q9CPS7 248 aaKnown RBP12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mrpl24Q9CQ06 216 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Izumo1Q9D9J7 397 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tex29Q9DA77 186 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 RhcgQ9QXP0 498 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Fbxl6Q9QXW0 535 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Bex2Q9WTZ8 129 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Spint2Q9WU03 252 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Col4a2P08122 1707 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Kntc1Q8C3Y4 2207 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Wdfy1E9Q4P1 410 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm8356J3QPD3 205 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Hnrnpa2b1O88569 353 aaKnown RBP12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 P01800 113 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ctla4P09793 223 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 KitlgP20826 273 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 SlbpP97440 275 aaKnown RBP12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Smn1P97801 288 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 JPT1P97825 154 aaKnown RBP12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Hoxc4Q08624 264 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 KcnrgQ2TUM3 264 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Defb41Q30KP6 65 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Fndc4Q3TR08 231 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Nudt18Q3U2V3 323 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Thsd4Q3UTY6 1018 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Clns1aQ61189 236 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mc2rQ64326 296 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tmprss7Q8BIK6 829 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Q8BR90 294 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Hbq1aQ8BYM1 145 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Slc35f4Q8BZK4 485 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Pom121Q8K3Z9 1200 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Sav1Q8VEB2 386 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr593Q8VF28 327 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Tmem42Q9CR22 157 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Fxyd6Q9D164 94 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Elovl7Q9D2Y9 281 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Marveld3Q9D956 376 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Mllt1Q9ERL0 547 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Chrm2Q9ERZ4 466 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 SclyQ9JLI6 432 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Pla2g2fQ9QZT4 168 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Hebp2Q9WU63 205 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 CenpfE9Q3P4 2997 aaKnown RBP12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Dock4P59764 1978 aa12.03□□□□□ -0.48
Nup88-201ENSMUST00000035283 Gm11634A0A1B0GSX1 172 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Trav12-2A0N8N6 114 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Hbb-bh2B2RVB7 147 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vmn1r124D3YTX4 307 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Vmn1r175K7N6T9 304 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 BC117090L7N257 96 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 AipO08915 330 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Phb2O35129 299 aaKnown RBP12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Nme1P15532 152 aaKnown RBP12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ldlrad2Q3V0V0 142 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1216Q7TR05 311 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1135Q7TR42 310 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr1133Q7TR44 313 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Synpo2lQ8BWB1 975 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Fam120cQ8C3F2 1091 aaKnown RBP12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Esco2Q8CIB9 592 aaKnown RBP12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Nsun5Q8K4F6 465 aaKnown RBP12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Olfr46Q8VGJ4 318 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Ubl7Q91W67 380 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Pot1Q91WC1 640 aaKnown RBP12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 MallQ91X49 154 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 Zfp61Q923D1 555 aa12.02□□□□□ -0.48
Nup88-201ENSMUST00000035283 LsrQ99KG5 594 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms