RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 UBCP0CG48 685 aaKnown RBP11.19□□□□□ -0.62
GTF3A-209ENST00000640289 EEF1B2P24534 225 aaKnown RBP11.19□□□□□ -0.62
GTF3A-209ENST00000640289 TGM4P49221 684 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 WNT4P56705 351 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 MRPL28Q13084 256 aaKnown RBP11.19□□□□□ -0.62
GTF3A-209ENST00000640289 PRDX4Q13162 271 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 MAB21L1Q13394 359 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 IRF3Q14653 427 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 CDK5R1Q15078 307 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 DMRTC1Q5HYR2 192 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 RNLSQ5VYX0 342 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 SHEQ5VZ18 495 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 DNM1P46Q6ZS02 220 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 ZNF676Q8N7Q3 588 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 ZFP41Q8N8Y5 198 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 OR51A4Q8NGJ6 313 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 UBASH3BQ8TF42 649 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 PIGCQ92535 297 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 MEGF10Q96KG7 1140 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 Q96MF0 132 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 OR5M11Q96RB7 305 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 IL19Q9UHD0 177 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 BLOC1S6Q9UL45 172 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 PNMA8CA0A1B0GUJ8 204 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 GMDSO60547 372 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 CST4P01036 141 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 ATP6V1B1P15313 513 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 TNFSF4P23510 183 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 GNALP38405 381 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 MAP2K4P45985 399 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 RIPPLY1Q0D2K3 151 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 CCDC58Q4VC31 144 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 TMEM244Q5VVB8 128 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 PRAMEF6Q5VXH4 476 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 RPL22L1Q6P5R6 122 aaKnown RBP11.18□□□□□ -0.62
GTF3A-209ENST00000640289 PRSS57Q6UWY2 283 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 Q6ZSR3 168 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 PRSS48Q7RTY5 328 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 OR5AK2Q8NH90 309 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 RDH5Q92781 318 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 MND1Q9BWT6 205 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 EGLN1Q9GZT9 426 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 FGF23Q9GZV9 251 aaPredicted RBP11.18□□□□□ -0.62
GTF3A-209ENST00000640289 SLC22A4Q9H015 551 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 TRIM36Q9NQ86 728 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 ENPP5Q9UJA9 477 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 LSM2Q9Y333 95 aaKnown RBP11.18□□□□□ -0.62
GTF3A-209ENST00000640289 LRRC42Q9Y546 428 aa11.18□□□□□ -0.62
GTF3A-209ENST00000640289 AKAP9Q99996 3911 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 IGHV1-69-2A0A0G2JMI3 117 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 LOC100289279A0A1B0GTE1 492 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 TRIM64A6NGJ6 449 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 TRIM64BA6NI03 449 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 TMEM212A6NML5 194 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 OGG1O15527 345 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 ISG15P05161 165 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 ACHEP22303 614 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 CD200P41217 278 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 CRYBB2P43320 205 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 SRP9P49458 86 aaKnown RBP11.17□□□□□ -0.62
GTF3A-209ENST00000640289 PDLIM4P50479 330 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 CDH15P55291 814 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 GABARAPL2P60520 117 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 SLC3A1Q07837 685 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 MED22Q15528 200 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 CEP78Q5JTW2 689 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 DMKNQ6E0U4 476 aaPredicted RBP11.17□□□□□ -0.62
GTF3A-209ENST00000640289 CLEC2AQ6UVW9 174 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 KRT74Q7RTS7 529 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 WDR86Q86TI4 376 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 FTMTQ8N4E7 242 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 OR8S1Q8NH09 359 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 ZNF420Q8TAQ5 688 aaPredicted RBP11.17□□□□□ -0.62
GTF3A-209ENST00000640289 RPS4Y2Q8TD47 263 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 HAVCR2Q8TDQ0 301 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 C10orf105Q8TEF2 133 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 HPSE2Q8WWQ2 592 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 RGP1Q92546 391 aaPredicted RBP11.17□□□□□ -0.62
GTF3A-209ENST00000640289 FAM168AQ92567 244 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 CCL17Q92583 94 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 ITPKCQ96DU7 683 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 COMMD4Q9H0A8 199 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 PLEKHA1Q9HB21 404 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 GPR173Q9NS66 373 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 ZNF275Q9NSD4 429 aaPredicted RBP11.17□□□□□ -0.62
GTF3A-209ENST00000640289 DCAF16Q9NXF7 216 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 MPC1Q9Y5U8 109 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 NAV2Q8IVL1 2488 aa11.17□□□□□ -0.62
GTF3A-209ENST00000640289 TACC2O95359 2948 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 RP2O75695 350 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 TNFRSF1AP19438 455 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 THBS2P35442 1172 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 PMELP40967 661 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 SPHARQ15513 63 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 MPPED2Q15777 294 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 CLVS2Q5SYC1 327 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 ZBTB37Q5TC79 503 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 TMEM42Q69YG0 159 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 MOB3CQ70IA8 216 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms