RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 EFNB2P52799 333 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 LOXL3P58215 753 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 C11orf91Q3C1V1 193 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 ZBTB37Q5TC79 503 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 WDR82Q6UXN9 313 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 ZDHHC21Q8IVQ6 265 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 C11orf53Q8IXP5 236 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 FAM86B1Q8N7N1 296 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 OR9Q1Q8NGQ5 310 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 SLAMF6Q96DU3 332 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 PPP1R3EQ9H7J1 279 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 RNPEPL1Q9HAU8 725 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 ELL3Q9HB65 397 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-228ENST00000639659 DNAJC27Q9NZQ0 273 aa12.27□□□□□ -0.45
SYNE2-228ENST00000639659 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-228ENST00000639659 GADD45GO95257 159 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 CX3CR1P49238 355 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 BLMHQ13867 455 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 NCR3LG1Q68D85 454 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 PGBD2Q6P3X8 592 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 KCTD8Q6ZWB6 473 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 SLC16A9Q7RTY1 509 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 PPP1R14AQ96A00 147 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 KCNJ15Q99712 375 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 WDR13Q9H1Z4 485 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 OPA3Q9H6K4 179 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 BRD7Q9NPI1 651 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 AURKAIP1Q9NWT8 199 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-228ENST00000639659 SLC25A10Q9UBX3 287 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-228ENST00000639659 NBEAL2Q6ZNJ1 2754 aa12.26□□□□□ -0.45
SYNE2-228ENST00000639659 H0YAE9 185 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 COX4I1P13073 169 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 HSD11B1P28845 292 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 GABRA2P47869 451 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 NUDT2P50583 147 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 UBE2E1P51965 193 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 STUMQ69YW2 141 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 CGB2Q6NT52 195 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 FAM185AQ8N0U4 392 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 BEND2Q8NDZ0 799 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 OR4S1Q8NGB4 309 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 OR52L1Q8NGH7 329 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 OR2T4Q8NH00 348 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 ZNRF4Q8WWF5 429 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 RPL3LQ92901 407 aaKnown RBP12.25□□□□□ -0.45
SYNE2-228ENST00000639659 TNFRSF14Q92956 283 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 DUS3LQ96G46 650 aaKnown RBP12.25□□□□□ -0.45
SYNE2-228ENST00000639659 REEP6Q96HR9 211 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 FAM234AQ9H0X4 552 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 EGLN3Q9H6Z9 239 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 METTL8Q9H825 291 aaKnown RBP12.25□□□□□ -0.45
SYNE2-228ENST00000639659 NECAP2Q9NVZ3 263 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 HAO2Q9NYQ3 351 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 COMMD3-BMI1R4GMX3 469 aa12.25□□□□□ -0.45
SYNE2-228ENST00000639659 ANXA2P2A6NMY6 339 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 ZNF878C9JN71 531 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 AKR7A2O43488 359 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 XPNPEP2O43895 674 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 FBXO24O75426 580 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 GMNNO75496 209 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 TIPRLO75663 272 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 GYPBP06028 91 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 AMY2BP19961 511 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 OTX1P32242 354 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-228ENST00000639659 DDOSTP39656 456 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 ENTPD1P49961 510 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 FAM3AP98173 230 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 ACSM1Q08AH1 577 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 DGUOKQ16854 277 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 PLA1AQ53H76 456 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 GLYATQ6IB77 296 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 FAM57BQ71RH2 274 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 CPLX4Q7Z7G2 160 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 ZNF511Q8NB15 262 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 TMEM185AQ8NFB2 350 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 OR6K6Q8NGW6 343 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 RP9Q8TA86 221 aaKnown RBP12.24□□□□□ -0.45
SYNE2-228ENST00000639659 R3HDM4Q96D70 268 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 C7orf34Q96L11 122 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 GAFA1Q96PS6 74 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 MICU1Q9BPX6 476 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 HOPXQ9BPY8 73 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-228ENST00000639659 NPFFR1Q9GZQ6 430 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.24□□□□□ -0.45
SYNE2-228ENST00000639659 SAMD4AQ9UPU9 718 aaKnown RBP12.24□□□□□ -0.45
SYNE2-228ENST00000639659 SF3B6Q9Y3B4 125 aaKnown RBP12.24□□□□□ -0.45
SYNE2-228ENST00000639659 RHBDD3Q9Y3P4 386 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 MAB21L2Q9Y586 359 aa12.24□□□□□ -0.45
SYNE2-228ENST00000639659 IDH3BO43837 385 aa12.23□□□□□ -0.45
SYNE2-228ENST00000639659 IFNGR2P38484 337 aa12.23□□□□□ -0.45
SYNE2-228ENST00000639659 KIR2DS4P43632 304 aa12.23□□□□□ -0.45
SYNE2-228ENST00000639659 TGM4P49221 684 aa12.23□□□□□ -0.45
SYNE2-228ENST00000639659 BMXP51813 675 aa12.23□□□□□ -0.45
SYNE2-228ENST00000639659 CAPZA1P52907 286 aa12.23□□□□□ -0.45
SYNE2-228ENST00000639659 SMIM11AP58511 58 aa12.23□□□□□ -0.45
SYNE2-228ENST00000639659 EIF2B1Q14232 305 aaKnown RBP12.23□□□□□ -0.45
SYNE2-228ENST00000639659 HABP2Q14520 560 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-228ENST00000639659 ARSJQ5FYB0 599 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-228ENST00000639659 C11orf88Q6PI97 169 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms