RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SPSB1Q96BD6 273 aa13.27□□□□□ -0.29
CLN6-219ENST00000637329 DIRAS2Q96HU8 199 aa13.27□□□□□ -0.29
CLN6-219ENST00000637329 CCDC32Q9BV29 185 aa13.27□□□□□ -0.29
CLN6-219ENST00000637329 REPIN1Q9BWE0 567 aaKnown RBP13.27□□□□□ -0.29
CLN6-219ENST00000637329 CYSLTR2Q9NS75 346 aa13.27□□□□□ -0.29
CLN6-219ENST00000637329 EIF3KQ9UBQ5 218 aaKnown RBP13.27□□□□□ -0.29
CLN6-219ENST00000637329 ZNF816-ZNF321PA0A0X1KG74 233 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 SMPD2O60906 423 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 CCL2P13500 99 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 PRF1P14222 555 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 SNRPBP14678 240 aaKnown RBP13.26□□□□□ -0.29
CLN6-219ENST00000637329 ACKR3P25106 362 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 HTR2CP28335 458 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 EVX1P49640 407 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 CLVS2Q5SYC1 327 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 CNIH2Q6PI25 160 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 RFPL4BQ6ZWI9 263 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 MYPOPQ86VE0 399 aaPredicted RBP13.26□□□□□ -0.29
CLN6-219ENST00000637329 CSNK2A3Q8NEV1 391 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 SSC4DQ8WTU2 575 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 RAB40AQ8WXH6 277 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 PIGTQ969N2 578 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 S100PBPQ96BU1 408 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 MUCL1Q96DR8 90 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 ACTR6Q9GZN1 396 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 KCNN3Q9UGI6 736 aa13.26□□□□□ -0.29
CLN6-219ENST00000637329 SPTAN1Q13813 2472 aaKnown RBP13.25□□□□□ -0.29
CLN6-219ENST00000637329 LOC100289279A0A1B0GTE1 492 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 FAM25AB3EWG3 89 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 FAM25CB3EWG5 89 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 FAM25GB3EWG6 89 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 PAHP00439 452 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 CELA3BP08861 270 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 ELK1P19419 428 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 NR4A2P43354 598 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 TNK1Q13470 666 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 GK2Q14410 553 aaPredicted RBP13.25□□□□□ -0.29
CLN6-219ENST00000637329 PPA1Q15181 289 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 XKRXQ6PP77 449 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 FBXW12Q6X9E4 464 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 ZNF101Q8IZC7 436 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 PAQR4Q8N4S7 273 aaPredicted RBP13.25□□□□□ -0.29
CLN6-219ENST00000637329 JAGN1Q8N5M9 183 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 UBASH3BQ8TF42 649 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 ABCG5Q9H222 651 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 OR5V1Q9UGF6 321 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 RHBDD3Q9Y3P4 386 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 SVILO95425 2214 aa13.25□□□□□ -0.29
CLN6-219ENST00000637329 INTS1Q8N201 2190 aaKnown RBP13.25□□□□□ -0.29
CLN6-219ENST00000637329 TEP1Q99973 2627 aaKnown RBP13.24□□□□□ -0.29
CLN6-219ENST00000637329 IGHV1-18A0A0C4DH31 117 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 IGKV1-9A0A0C4DH69 117 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 A0A1W2PR80 420 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 FABP12A6NFH5 140 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 J3QRK9 145 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 TPPPO94811 219 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 EIF4EP06730 217 aaKnown RBP13.24□□□□□ -0.29
CLN6-219ENST00000637329 HCKP08631 526 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 CECR9P0C854 216 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 OCMP0CE72 109 aaPredicted RBP13.24□□□□□ -0.29
CLN6-219ENST00000637329 UBBP0CG47 229 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 PPP3CBP16298 524 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 PRKACBP22694 351 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 AZGP1P25311 298 aaKnown RBP13.24□□□□□ -0.29
CLN6-219ENST00000637329 CHRNB4P30926 498 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 CCKARP32238 428 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 ZNF93P35789 620 aaPredicted RBP13.24□□□□□ -0.29
CLN6-219ENST00000637329 ASCL1P50553 236 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 C16orf87Q6PH81 154 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 GDPD1Q8N9F7 314 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 PNLDC1Q8NA58 520 aaKnown RBP13.24□□□□□ -0.29
CLN6-219ENST00000637329 OR52N4Q8NGI2 321 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 OR5H6Q8NGV6 325 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 SLC25A28Q96A46 364 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 PTX4Q96A99 478 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 FAM3DQ96BQ1 224 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 SLC25A38Q96DW6 304 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 SOSTQ9BQB4 213 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 BCL2L14Q9BZR8 327 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 PTTG3PQ9NZH4 202 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 OSGIN2Q9Y236 505 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 STARD10Q9Y365 291 aa13.24□□□□□ -0.29
CLN6-219ENST00000637329 SHANK1Q9Y566 2161 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 A0A0B4J203 849 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 A6NIN4 97 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 BPNT1O95861 308 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 CST4P01036 141 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 NGFP01138 241 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 ZNF35P13682 527 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 ARSBP15848 533 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 POU3F4P49335 361 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 PPP1CBP62140 327 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 TLE1Q04724 770 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 UBE2V2Q15819 145 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 ZNF79Q15937 498 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 ZNF181Q2M3W8 571 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 FBXL19-AS1Q494R0 122 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 MTFR2Q6P444 385 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms