RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 NIPAL2Q9H841 368 aa12.48□□□□□ -0.41
CACNA1A-230ENST00000636768 PAPOLBQ9NRJ5 636 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-230ENST00000636768 TVP23BQ9NYZ1 205 aa12.48□□□□□ -0.41
CACNA1A-230ENST00000636768 ZNF319Q9P2F9 582 aa12.48□□□□□ -0.41
CACNA1A-230ENST00000636768 LAMP5Q9UJQ1 280 aa12.48□□□□□ -0.41
CACNA1A-230ENST00000636768 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
CACNA1A-230ENST00000636768 RHBDD3Q9Y3P4 386 aa12.48□□□□□ -0.41
CACNA1A-230ENST00000636768 IGHV3OR15-7A0A075B7D8 119 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 PLATP00750 562 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 EGR1P18146 543 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 IL5RAQ01344 420 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 POU4F2Q12837 409 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 APOFQ13790 326 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 MICBQ29980 383 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 AWAT1Q58HT5 328 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 GPR157Q5UAW9 335 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 LCN1P1Q5VSP4 162 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 C9orf139Q6ZV77 190 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 SLC25A28Q96A46 364 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 NRBF2Q96F24 287 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 PCGF1Q9BSM1 259 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 RTL8AQ9BWD3 113 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 RNPEPL1Q9HAU8 725 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 SMURF1Q9HCE7 757 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 LRP12Q9Y561 859 aa12.47□□□□□ -0.41
CACNA1A-230ENST00000636768 TMPRSS2O15393 492 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 LHBP01229 141 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 LIPFP07098 398 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 MRPL3P09001 348 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 SLC2A5P22732 501 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 CRISP1P54107 249 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 PRDX4Q13162 271 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 TEX36Q5VZQ5 186 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 BRD3OSQ6XYD6 125 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 PNLDC1Q8NA58 520 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 OR8B12Q8NGG6 310 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 ST8SIA4Q92187 359 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 CADM1Q9BY67 442 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 RASSF4Q9H2L5 321 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 PPP1R3EQ9H7J1 279 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 ABCB9Q9NP78 766 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 ZNF391Q9UJN7 358 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 MPC1Q9Y5U8 109 aa12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 SOX21Q9Y651 276 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-230ENST00000636768 ZNF850A8MQ14 1090 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 ZNF879B4DU55 563 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 DVL1O14640 695 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 CDIPTO14735 213 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 TNFRSF13BO14836 293 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 GSC2O15499 205 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 TOX4O94842 621 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 SFTPBP07988 381 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 RNASE1P07998 156 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 HKR1P10072 659 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 MUC1P15941 1255 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 ALOX5APP20292 161 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 ACKR3P25106 362 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 CFHR2P36980 270 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 HCCSP53701 268 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 GMFBP60983 142 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 FOXL1Q12952 345 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 SLC9A3R2Q15599 337 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 METTL11BQ5VVY1 283 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 FAHD1Q6P587 224 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 KCTD18Q6PI47 426 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 WDR82Q6UXN9 313 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 KCTD8Q6ZWB6 473 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 COMMD2Q86X83 199 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 C11orf53Q8IXP5 236 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 GALNT4Q8N4A0 578 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 OR5K1Q8NHB7 308 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 FAM81AQ8TBF8 368 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 PIGCQ92535 297 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 ITPKCQ96DU7 683 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 PKP2Q99959 881 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 YIPF3Q9GZM5 350 aa12.45□□□□□ -0.42
CACNA1A-230ENST00000636768 MDFIC2A0A1B0GVS7 189 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 TMEM210A6NLX4 147 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 CLDN34H7C241 214 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 PSMD9O00233 223 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 P2RY10O00398 339 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 RASSF2P50749 326 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 DAPP51397 102 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 BPIFB3P59826 476 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 ESRRGP62508 458 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 BNIP1Q12981 228 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 PTGES3Q15185 160 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 WDR38Q5JTN6 314 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 BTN2A1Q7KYR7 527 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 SLC36A1Q7Z2H8 476 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 ZDHHC23Q8IYP9 409 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 UTP4Q969X6 686 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 RNF170Q96K19 258 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 LYZL4Q96KX0 146 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 WDFY2Q96P53 400 aa12.44□□□□□ -0.42
CACNA1A-230ENST00000636768 HIST1H2AAQ96QV6 131 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms