RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TMEM17Q86X19 198 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 OR5H2Q8NGV7 314 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 C2CD4CQ8TF44 421 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 DYRK2Q92630 601 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 TMEM230Q96A57 120 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 MED9Q9NWA0 146 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 DUS4LO95620 317 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 BPNT1O95861 308 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 FOSL2P15408 326 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 NFYBP25208 207 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 SNU13P55769 128 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 OR2AE1Q8NHA4 323 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 PGAM5Q96HS1 289 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 UCN2Q96RP3 112 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 FAM117AQ9C073 453 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 TLNRD1Q9H1K6 362 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 HPF1Q9NWY4 346 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 IGKV1D-8A0A087WSZ0 117 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 HIST1H1DP16402 221 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 NME2P22392 152 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 OPRM1P35372 400 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 RRADP55042 308 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 C17orf82Q86X59 251 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 ST8SIA1Q92185 356 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF837Q96EG3 531 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 C10orf142B7Z368 130 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 IGHMP01871 453 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 FCGR2AP12318 317 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 SP6Q3SY56 376 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 PIK3IP1Q96FE7 263 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 B3GALT5Q9Y2C3 310 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 GPR179Q6PRD1 2367 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 CPAMD8Q8IZJ3 1885 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 TMEM14DPA8MWL7 114 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 BET1O15155 118 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 NUDT21O43809 227 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 TPPPO94811 219 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 F10P00742 488 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 GLB1P16278 677 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 PLPPR5Q32ZL2 321 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 HAGHLQ6PII5 290 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 OR13G1Q8NGZ3 307 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 NUBPLQ8TB37 319 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 TOMM40LQ969M1 308 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 ALKBH4Q9NXW9 302 aa12.37□□□□□ -0.43
CACNA1A-228ENST00000636610 NBEAQ8NFP9 2946 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 A0A1B0GW55 424 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 CCDC85CA6NKD9 419 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 TRAF3IP2O43734 574 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 MELTFP08582 738 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 DUX4L2P0CJ85 424 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 DUX4L3P0CJ86 424 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 DUX4L4P0CJ87 422 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 DUX4L5P0CJ88 424 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 DUX4L6P0CJ89 424 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 DUX4L7P0CJ90 424 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 PGA4P0DJD7 388 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 PGA3P0DJD8 388 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 RAB6AP20340 208 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 CFPP27918 469 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 SUPT4H1P63272 117 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 H3F3CQ6NXT2 135 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 ETV3LQ6ZN32 361 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 HOGA1Q86XE5 327 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 LDLRAD3Q86YD5 345 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 BAP18Q8IXM2 172 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 NOXO1Q8NFA2 376 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 AIFM2Q9BRQ8 373 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 MRPL13Q9BYD1 178 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 MYOTQ9UBF9 498 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 DUX4Q9UBX2 424 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF407Q9C0G0 2248 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 BCAT2O15382 392 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 ATG12O94817 140 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 SLC25A4P12235 298 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 RBM39Q14498 530 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 KISS1Q15726 138 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 PCK2Q16822 640 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 TMEM128Q5BJH2 165 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 PHYHD1Q5SRE7 291 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 PHF19Q5T6S3 580 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 TSPO2Q5TGU0 170 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 OR2A2Q6IF42 318 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 CLRN3Q8NCR9 226 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF385AQ96PM9 386 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 DEFB126Q9BYW3 111 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF160Q9HCG1 818 aa12.36□□□□□ -0.43
CACNA1A-228ENST00000636610 TMEM218A2RU14 115 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 TTLL8A6PVC2 850 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 SLC33A1O00400 549 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 SPRY1O43609 319 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 IL2RAP01589 272 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 THEM4Q5T1C6 240 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 RPL7L1Q6DKI1 246 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 LPCAT3Q6P1A2 487 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 NFAM1Q8NET5 270 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 KCNG3Q8TAE7 436 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms