RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ECDO95905 644 aaPredicted RBP14.89□□□□□ -0.03
PNKP-225ENST00000636214 MUC1P15941 1255 aaPredicted RBP14.89□□□□□ -0.03
PNKP-225ENST00000636214 CFHR2P36980 270 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 CBX1P83916 185 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 HOXA4Q00056 320 aaPredicted RBP14.89□□□□□ -0.03
PNKP-225ENST00000636214 TUSC1Q2TAM9 212 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 SLC35D3Q5M8T2 416 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 SHISA2Q6UWI4 295 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 TRPM8Q7Z2W7 1104 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 FAM90A1Q86YD7 464 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 OR1M1Q8NGA1 313 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 OTOSQ8NHW6 89 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 FAM81AQ8TBF8 368 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 GATAD2BQ8WXI9 593 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 NIPAL2Q9H841 368 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 DNAJB11Q9UBS4 358 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 ZNF391Q9UJN7 358 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 LAMP5Q9UJQ1 280 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 MPC1Q9Y5U8 109 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 IGHV3OR15-7A0A075B7D8 119 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 DVL1O14640 695 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 CRYBA1P05813 215 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 C11orf91Q3C1V1 193 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 TEX36Q5VZQ5 186 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 KCTD8Q6ZWB6 473 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 SLC36A1Q7Z2H8 476 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 KRT77Q7Z794 578 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 TMEM179BQ7Z7N9 219 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 CPOQ8IVL8 374 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 HIST1H2AAQ96QV6 131 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 AMELYQ99218 206 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 ZNF747Q9BV97 191 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 NOX4Q9NPH5 578 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 DNAJB9Q9UBS3 223 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 RHBDD3Q9Y3P4 386 aa14.88□□□□□ -0.03
PNKP-225ENST00000636214 DYNC1I1O14576 645 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 FKBP6O75344 327 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 PSMA6P60900 246 aaKnown RBP14.87□□□□□ -0.03
PNKP-225ENST00000636214 POU4F2Q12837 409 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 PDCD1Q15116 288 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 DEFB112Q30KQ8 113 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 LCN1P1Q5VSP4 162 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 C16orf87Q6PH81 154 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 BTN2A1Q7KYR7 527 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 SCCPDHQ8NBX0 429 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 DNAJC9Q8WXX5 260 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 C1orf147Q96MC9 270 aaPredicted RBP14.87□□□□□ -0.03
PNKP-225ENST00000636214 WDFY2Q96P53 400 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 PRRG3Q9BZD7 231 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 RASSF4Q9H2L5 321 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 UNKLQ9H9P5 680 aaKnown RBP14.87□□□□□ -0.03
PNKP-225ENST00000636214 KAAG1Q9UBP8 84 aa14.87□□□□□ -0.03
PNKP-225ENST00000636214 MDFIC2A0A1B0GVS7 189 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 NKX6-3A6NJ46 265 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 TMEM210A6NLX4 147 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 CDIPTO14735 213 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 HOXA3O43365 443 aaPredicted RBP14.86□□□□□ -0.03
PNKP-225ENST00000636214 LHBP01229 141 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 EGR1P18146 543 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 PRKACGP22612 351 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 CSNK2BP67870 215 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 CDK5Q00535 292 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 SNAPC1Q16533 368 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 RUSC1-AS1Q66K80 236 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 KCTD18Q6PI47 426 aaPredicted RBP14.86□□□□□ -0.03
PNKP-225ENST00000636214 PRSS45Q7RTY3 260 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 COMMD2Q86X83 199 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 CMTM4Q8IZR5 234 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 HS3ST5Q8IZT8 346 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 GALNT4Q8N4A0 578 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 PAPD5Q8NDF8 572 aaKnown RBP14.86□□□□□ -0.03
PNKP-225ENST00000636214 BCAS4Q8TDM0 211 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 C12orf43Q96C57 262 aaKnown RBP14.86□□□□□ -0.03
PNKP-225ENST00000636214 FAM71F1Q96KD3 344 aaPredicted RBP14.86□□□□□ -0.03
PNKP-225ENST00000636214 SMURF1Q9HCE7 757 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 TNFRSF19Q9NS68 423 aa14.86□□□□□ -0.03
PNKP-225ENST00000636214 POM121CA8CG34 1229 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 ZNF850A8MQ14 1090 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 SRRM5B3KS81 715 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 NDUFB3O43676 98 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 DNAJC8O75937 253 aaPredicted RBP14.85□□□□□ -0.03
PNKP-225ENST00000636214 SFTPBP07988 381 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 GMFBP60983 142 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 ARF6P62330 175 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 PRDX4Q13162 271 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 LRRC10Q5BKY1 277 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 WDR82Q6UXN9 313 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 ZDHHC23Q8IYP9 409 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 BBS1Q8NFJ9 593 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 PIGCQ92535 297 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 LHX4Q969G2 390 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 ITPKCQ96DU7 683 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 CCL13Q99616 98 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 MROQ9BYG7 248 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 SLC25A19Q9HC21 320 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 PAPOLBQ9NRJ5 636 aaKnown RBP14.85□□□□□ -0.03
PNKP-225ENST00000636214 TVP23BQ9NYZ1 205 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 ONECUT1Q9UBC0 465 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 LRP12Q9Y561 859 aa14.85□□□□□ -0.03
PNKP-225ENST00000636214 SOX21Q9Y651 276 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms