RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 GTPBP8Q8N3Z3 284 aaPredicted RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 POMGNT2Q8NAT1 580 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 CYB561A3Q8NBI2 242 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 OR4M1Q8NGD0 313 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 OR51A7Q8NH64 312 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ENKURQ8TC29 256 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 HAVCR2Q8TDQ0 301 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 CAPSLQ8WWF8 208 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 OIT3Q8WWZ8 545 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 OTULINQ96BN8 352 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 FBXO17Q96EF6 278 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 NEU1Q99519 415 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 C19orf24Q9BVV8 132 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 OR51V1Q9H2C8 321 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 GCM1Q9NP62 436 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 NUFIP1Q9UHK0 495 aaKnown RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 KLHL21Q9UJP4 597 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 MRPS18CQ9Y3D5 142 aaKnown RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 IGKV1D-42A0A075B6H8 117 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 A0A087WUJ7 227 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 A0A0G2JMP0 313 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 A0A0X1KG70 313 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 TTC36A6NLP5 189 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 MCIDASD6RGH6 385 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 NDUFB2O95178 105 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 HIST1H1CP16403 213 aaKnown RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 SLC6A1P30531 599 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 BTCP35070 178 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ATP12AP54707 1039 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 RPS11P62280 158 aaKnown RBP eCLIP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 MADCAM1Q13477 382 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 CDK5R1Q15078 307 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 TATDN3Q17R31 274 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 PLPPR5Q32ZL2 321 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 IDNKQ5T6J7 187 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 TFAP2EQ6VUC0 442 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 CMTM4Q8IZR5 234 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 GABRG1Q8N1C3 465 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 OR4M2Q8NGB6 313 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 FAM168AQ92567 244 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ADAD1Q96M93 576 aaKnown RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 RANGRFQ9HD47 186 aaPredicted RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 PAQR5Q9NXK6 330 aaPredicted RBP4.19□□□□□ -1.74
LINC00550-201ENST00000629293 KLHL13Q9P2N7 655 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 EXTL2Q9UBQ6 330 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 HSF4Q9ULV5 492 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 B3GALT5Q9Y2C3 310 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 ALG5Q9Y673 324 aa4.19□□□□□ -1.74
LINC00550-201ENST00000629293 SERINC4A6NH21 518 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ARPC3O15145 178 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 LANCL1O43813 399 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 LMX1BO60663 402 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 UCHL1P09936 223 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 OR2T7P0C7T2 308 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 GZMKP49863 264 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 FABP6P51161 128 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ACTA2P62736 377 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ACTG2P63267 376 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 RASGEF1BQ0VAM2 473 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 KLHL26Q53HC5 615 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 CEP78Q5JTW2 689 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 HACD4Q5VWC8 232 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 PLET1Q6UQ28 207 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 NOXA1Q86UR1 476 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 SLC7A5P1Q8MH63 180 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 FBXL14Q8N1E6 418 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 MUC15Q8N387 334 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 MS4A15Q8N5U1 240 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 NPEPL1Q8NDH3 523 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 C19orf18Q8NEA5 215 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 OR2T27Q8NH04 317 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 POC1BQ8TC44 478 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 LIPHQ8WWY8 451 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 HSD17B8Q92506 261 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 CREB3L1Q96BA8 519 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 SMIM19Q96E16 107 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 SGTBQ96EQ0 304 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 PELI1Q96FA3 418 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 FYTTD1Q96QD9 318 aaKnown RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 CNN2Q99439 309 aaKnown RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 SLC19A3Q9BZV2 496 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 NRIP3Q9NQ35 241 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 UBQLN4Q9NRR5 601 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 RASD1Q9Y272 281 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 CENPXA8MT69 81 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 J3QLW9 94 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 OR7A10O76100 309 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 CD8AP01732 235 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 GYPBP06028 91 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 YES1P07947 543 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF19P17023 458 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 DIO1P49895 249 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 RPS7P62081 194 aaKnown RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 BTG1P62324 171 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF117Q03924 483 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 SLC3A1Q07837 685 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 GPR176Q14439 515 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 GUSBP1Q15486 140 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ACSM3Q53FZ2 586 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 YIF1BQ5BJH7 314 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms