RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 S100A14Q9HCY8 104 aa11.88□□□□□ -0.51
PNKP-223ENST00000629179 CLN6Q9NWW5 311 aa11.88□□□□□ -0.51
PNKP-223ENST00000629179 USE1Q9NZ43 259 aa11.88□□□□□ -0.51
PNKP-223ENST00000629179 WARS2Q9UGM6 360 aaKnown RBP11.88□□□□□ -0.51
PNKP-223ENST00000629179 POLR3KQ9Y2Y1 108 aaPredicted RBP11.88□□□□□ -0.51
PNKP-223ENST00000629179 ORC6Q9Y5N6 252 aa11.88□□□□□ -0.51
PNKP-223ENST00000629179 hCG_1807616A0A1W2PRN6 198 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 ZNF850A8MQ14 1090 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 A8MXK9 166 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 ZNF670-ZNF695F2Z2N8 137 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 C3orf80F5H4A9 247 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 LGALS8O00214 317 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 GATA3P23771 443 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 HTR1FP30939 366 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 DCTDP32321 178 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 ALDH3A2P51648 485 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 CDC42P60953 191 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 MFGE8Q08431 387 aaPredicted RBP11.87□□□□□ -0.51
PNKP-223ENST00000629179 PRDX4Q13162 271 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 ZNF829Q3KNS6 432 aaPredicted RBP11.87□□□□□ -0.51
PNKP-223ENST00000629179 PLEKHG7Q6ZR37 379 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 SSX6Q7RTT6 188 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 OR1M1Q8NGA1 313 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 FAM81AQ8TBF8 368 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 EME1Q96AY2 570 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 ITPKCQ96DU7 683 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 NEIL1Q96FI4 390 aaPredicted RBP11.87□□□□□ -0.51
PNKP-223ENST00000629179 HRASLS5Q96KN8 279 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 MNTQ99583 582 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 SLC29A1Q99808 456 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 SSBP3Q9BWW4 388 aaPredicted RBP11.87□□□□□ -0.51
PNKP-223ENST00000629179 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.87□□□□□ -0.51
PNKP-223ENST00000629179 OPN4Q9UHM6 478 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 MRM2Q9UI43 246 aaKnown RBP11.87□□□□□ -0.51
PNKP-223ENST00000629179 LRCH1Q9Y2L9 728 aa11.87□□□□□ -0.51
PNKP-223ENST00000629179 STAB1Q9NY15 2570 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 PPIAL4CA0A0B4J2A2 164 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 A0A0U1RQV5 110 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 PHYHO14832 338 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 SRSF10O75494 262 aaKnown RBP11.86□□□□□ -0.51
PNKP-223ENST00000629179 CST4P01036 141 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 ZNF12P17014 697 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 EGR1P18146 543 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 MAP2K3P46734 347 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 GNB2P62879 340 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 CSNK2BP67870 215 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 ZNF154Q13106 437 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 SNCBQ16143 134 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 DCDC5Q6ZRR9 648 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 C1QL2Q7Z5L3 287 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 COMMD2Q86X83 199 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 GCSAMQ8N6F7 178 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 OR8B3Q8NGG8 313 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 OR51E1Q8TCB6 317 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 TMEM158Q8WZ71 300 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 FAM71F1Q96KD3 344 aaPredicted RBP11.86□□□□□ -0.51
PNKP-223ENST00000629179 OR8B2Q96RD0 313 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 MICU1Q9BPX6 476 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 GPR84Q9NQS5 396 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 IMPAD1Q9NX62 359 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 NUFIP1Q9UHK0 495 aaKnown RBP11.86□□□□□ -0.51
PNKP-223ENST00000629179 ZNF391Q9UJN7 358 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 GTF2A1LQ9UNN4 478 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 INSIG2Q9Y5U4 225 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 MPC1Q9Y5U8 109 aa11.86□□□□□ -0.51
PNKP-223ENST00000629179 IGHV3OR15-7A0A075B7D8 119 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 A0A1W2PQL4 384 aaPredicted RBP11.85□□□□□ -0.51
PNKP-223ENST00000629179 ANXA2P2A6NMY6 339 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 E9PQ18 207 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 LOC110117498-PIK3R3F6TDL0 507 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 LHBP01229 141 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 TTRP02766 147 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 CPT2P23786 658 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 ATP6V1E1P36543 226 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 PITPNBP48739 271 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 IL5RAQ01344 420 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 EGR3Q06889 387 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 POU4F2Q12837 409 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 KRTAP24-1Q3LI83 254 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 DMRTC1Q5HYR2 192 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 ZNF841Q6ZN19 808 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 NLRC3Q7RTR2 1065 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 PQLC1Q8N2U9 271 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 GALNT4Q8N4A0 578 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 FTMTQ8N4E7 242 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 YIPF7Q8N8F6 280 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 OR10H4Q8NGA5 316 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 NANPQ8TBE9 248 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 LRRC29Q8WV35 223 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
PNKP-223ENST00000629179 OR5P3Q8WZ94 311 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 RNF170Q96K19 258 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 MBOAT4Q96T53 435 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 C9orf16Q9BUW7 83 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 RTL8AQ9BWD3 113 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 FGF23Q9GZV9 251 aaPredicted RBP11.85□□□□□ -0.51
PNKP-223ENST00000629179 RNPEPL1Q9HAU8 725 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 AASSQ9UDR5 926 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 OR5V1Q9UGF6 321 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms