RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 RHBDD3Q9Y3P4 386 aa17.17■□□□□ 0.34
PTCD3-220ENST00000627371 ZANQ9Y493 2812 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.16■□□□□ 0.34
PTCD3-220ENST00000627371 A0A1B0GTI1 187 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 CLDN25C9JDP6 229 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 P2RY10O00398 339 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 SMAD7O15105 426 aaKnown RBP17.16■□□□□ 0.34
PTCD3-220ENST00000627371 CST4P01036 141 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 HTR1AP08908 422 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 INHBBP09529 407 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 MYL12AP19105 171 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 CCL1P22362 96 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 USF1P22415 310 aaPredicted RBP17.16■□□□□ 0.34
PTCD3-220ENST00000627371 GNALP38405 381 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 KIR3DL2P43630 455 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 GATA4P43694 442 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 ETV1P50549 477 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 LOXL1Q08397 574 aaPredicted RBP17.16■□□□□ 0.34
PTCD3-220ENST00000627371 MRPL28Q13084 256 aaKnown RBP17.16■□□□□ 0.34
PTCD3-220ENST00000627371 C6orf141Q5SZD1 244 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 ZBTB37Q5TC79 503 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 Q6ZSR3 168 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 CCL17Q92583 94 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 TREM2Q9NZC2 230 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 RAB26Q9ULW5 256 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 PPP1R3CQ9UQK1 317 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 MPC1Q9Y5U8 109 aa17.16■□□□□ 0.34
PTCD3-220ENST00000627371 ZNF816-ZNF321PA0A0X1KG74 233 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 PPIHO43447 177 aaKnown RBP17.15■□□□□ 0.34
PTCD3-220ENST00000627371 PTBP3O95758 552 aaKnown RBP17.15■□□□□ 0.34
PTCD3-220ENST00000627371 UBCP0CG48 685 aaKnown RBP17.15■□□□□ 0.34
PTCD3-220ENST00000627371 NANOS3P60323 173 aaKnown RBP17.15■□□□□ 0.34
PTCD3-220ENST00000627371 CSNK2BP67870 215 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 SLC3A1Q07837 685 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 MZT1Q08AG7 82 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 RIPPLY1Q0D2K3 151 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 ST3GAL4Q11206 333 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 MED21Q13503 144 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 ODF4Q2M2E3 257 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 DOK3Q7L591 496 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 MAPK1IP1LQ8NDC0 245 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 OR8S1Q8NH09 359 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 HAVCR2Q8TDQ0 301 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 ABCB9Q9NP78 766 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 TMEM106BQ9NUM4 274 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 FKBP14Q9NWM8 211 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 FRRS1LQ9P0K9 344 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 CAB39Q9Y376 341 aaPredicted RBP17.15■□□□□ 0.34
PTCD3-220ENST00000627371 V9GYS6 101 aa17.15■□□□□ 0.34
PTCD3-220ENST00000627371 IGHV4-61A0A0C4DH41 118 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 A0A1B0GVI7 797 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 DHRS7CA6NNS2 312 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 IFNL4K9M1U5 179 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 SLC1A7O00341 560 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 CCR9P51686 369 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 MVKQ03426 396 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 PRDX4Q13162 271 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 TMPRSS11AQ6ZMR5 421 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 AHSA2Q719I0 299 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 KLHL36Q8N4N3 616 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 OR14K1Q8NGZ2 314 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 ERGIC1Q969X5 290 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 ITPKCQ96DU7 683 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 ZNF184Q99676 751 aaPredicted RBP17.14■□□□□ 0.33
PTCD3-220ENST00000627371 PPP1R3EQ9H7J1 279 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 C14orf119Q9NWQ9 140 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 ENPP5Q9UJA9 477 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 PIGLQ9Y2B2 252 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 ABCA1O95477 2261 aa17.14■□□□□ 0.33
PTCD3-220ENST00000627371 IGHV3-64DA0A0J9YX35 117 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 LOC100289279A0A1B0GTE1 492 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 ANXA2P2A6NMY6 339 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 ZNF850A8MQ14 1090 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 SYT7O43581 403 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 FAHP16930 419 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 GBX2P52951 348 aaPredicted RBP17.13■□□□□ 0.33
PTCD3-220ENST00000627371 ALKBH1Q13686 389 aaKnown RBP17.13■□□□□ 0.33
PTCD3-220ENST00000627371 ZNF181Q2M3W8 571 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 PRAMEF6Q5VXH4 476 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 MOGAT3Q86VF5 341 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 ZDHHC23Q8IYP9 409 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 STX19Q8N4C7 294 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 CCDC54Q8NEL0 328 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 ZNF420Q8TAQ5 688 aaPredicted RBP17.13■□□□□ 0.33
PTCD3-220ENST00000627371 PIGCQ92535 297 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 TIMD4Q96H15 378 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 CHCHD3Q9NX63 227 aaKnown RBP17.13■□□□□ 0.33
PTCD3-220ENST00000627371 DCAF16Q9NXF7 216 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 CLEC2DQ9UHP7 191 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 ABCA2Q9BZC7 2435 aa17.13■□□□□ 0.33
PTCD3-220ENST00000627371 TEP1Q99973 2627 aaKnown RBP17.13■□□□□ 0.33
PTCD3-220ENST00000627371 LOC107986453A0A1B0GWG9 222 aa17.12■□□□□ 0.33
PTCD3-220ENST00000627371 OR4C45A6NMZ5 311 aa17.12■□□□□ 0.33
PTCD3-220ENST00000627371 ISG15P05161 165 aa17.12■□□□□ 0.33
PTCD3-220ENST00000627371 TGM4P49221 684 aa17.12■□□□□ 0.33
PTCD3-220ENST00000627371 HNRNPA0Q13151 305 aaKnown RBP17.12■□□□□ 0.33
PTCD3-220ENST00000627371 OR2G6Q5TZ20 316 aa17.12■□□□□ 0.33
PTCD3-220ENST00000627371 TMEM244Q5VVB8 128 aa17.12■□□□□ 0.33
PTCD3-220ENST00000627371 BIVMQ86UB2 503 aa17.12■□□□□ 0.33
PTCD3-220ENST00000627371 OR52N1Q8NH53 320 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms